Gene Rpic12D_3783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3783 
Symbol 
ID8021470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp348669 
End bp349268 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content69% 
IMG OID644832573 
Productchorismate mutase 
Protein accessionYP_002983714 
Protein GI241665355 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1605] Chorismate mutase 
TIGRFAM ID[TIGR01806] chorismate mutase, putative 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACC TTCTCAAGCG TCCCGCCGCC CGCAAGGGCG CTGCTCTCGC CTGTGCCTGC 
TGGCTCGTGG CGGGTTGTGC AACCCAGGCC GGCGCGCAGG AAGGCGCGTT CGCACCGGTG
CTGCGCCATC TCGCCGATCG CCTCCTCACC GCAGATCAGG TCGCCCTGAG CAAATGGGAC
TCCGGCCAGC CGGTCTACGA CCCGGCGCGC GAAGCCCAGG TCATTGCGAA CGTCTCGGCC
ATGGCGCCTG CCTACGGCGT GCAGGCAGCG GACGCGGCAG AGGTCTTCAC CGACCAGATC
GAAGCCAACA AGACAGTGCA ATACGCCCTG CTCAACGATT GGCGCAGGGC AGGCAGTGCG
CCCACGGCGC CGCGGCAGAG CCTGCCGAAC ACCATCCGAC CGCAACTCGA TACGCTGCAG
AAAGCCATCC TGCAGGGGCT GCACGAGGCC GGGCCTGCCC GCGCCCGGGC AGACTGCGCG
ACACAGGTCG CACTCGACGC CGAACGCGTC GCCCGCGAGA AATCGCTCGA TACGCTGCAT
CGCGTCGCCC TGGACCGCGC CACGGCAAGA CTGTGCCGGC AGCGTTCGGC ACGTTCCTGA
 
Protein sequence
MTNLLKRPAA RKGAALACAC WLVAGCATQA GAQEGAFAPV LRHLADRLLT ADQVALSKWD 
SGQPVYDPAR EAQVIANVSA MAPAYGVQAA DAAEVFTDQI EANKTVQYAL LNDWRRAGSA
PTAPRQSLPN TIRPQLDTLQ KAILQGLHEA GPARARADCA TQVALDAERV AREKSLDTLH
RVALDRATAR LCRQRSARS