| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3780 |
|---|
| Symbol | |
|---|
| ID | 8021467 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012857 |
|---|
| Strand | + |
|---|
| Start bp | 346261 |
|---|
| End bp | 347274 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644832570 |
|---|
| Product | 2-dehydropantoate 2-reductase |
|---|
| Protein accession | YP_002983711 |
|---|
| Protein GI | 241665352 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1893] Ketopantoate reductase |
|---|
| TIGRFAM ID | [TIGR00745] 2-dehydropantoate 2-reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.146686 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAGA TCTGCATTGT GGGGGCCGGC TCGATCGGCT GCTATCTCGG CGGCCGTCTG
CTGGCGGCGG GCGCCGACGT CACGCTGGTC GGCCGCGCAC GCATCGGCAG CGAACTGGGC
GCGCACGGCC TGACGCTCAC GGACTATCGC GGCGGCCGCT GGCGGGTGCC TGCCTCGGGC
ATGCCGTATG TGACCGACGC CAGCGCGGCG GCCAGCGCAG AACTCGTTCT CGTGACCGTC
AAATCCGCCG CGACGCCGTC CGTTGCAGAC GAGCTCAAGC CGCTGTTGCG CCCTGGCACC
ACCGTGGTCA GTTTCCAGAA CGGCCTGGGC AATGCCGACG TGCTGCGGGC CGCGCTGCCG
CAACACACCG TGCTGGCCGG CATGGTGCCG TTCAATGTCA TGCAGCCAGC ACCGGGCGCT
TTTCATCAGG GGACGGGCGG TGAACTGGAA GTGGCTGCAT CGCATGCGCT GCGGCCATTC
GTCGACGACT TCCGGCGTGC GGGATTGCCG CTGATGGAGC GCACCGACAT GATGGCGGTG
CAATGGGCCA AGCTGCTGCT CAACCTGAAC AACGCCGTCA ATGCGCTGGC CAACCGCCCG
TTGAAAGAAC AACTGTCGCA GCGTGCCTAT CGCCGCTGCC TGGCGCTGGC GCAAAGCGAG
GCGCTGAGGC TGCTCACGCG TGCGGGTATC CGGCCGGCCA GATTGACACC GGTGCCGCCC
GCATGGATTC CGCGCCTGCT TGCCACGCCC GATGCGCTCT TTGCGCGGCT GGGCGGAAAG
ATGCTTGCCA TCGATCCGCT GGCGCGTTCG TCCATGTCGG ACGATCTGGC GGCGGGGCGT
GCCACCGAGG TCGACTGGAT CAACGGCGAG GTCGTTCGGC TGGCGGAACG CCTGGGGCAG
CAGGCACCGG TGAATGCGCG GCTTTGCGCG CTCGTGCATG CCGCGGAAGC GGCCGTGCCC
CGACCGAACT GGTCGGGCCC CGATCTGCTG GCGGCCTTGC GCTCCGGAGC TTAA
|
|---|
| Protein sequence | MAKICIVGAG SIGCYLGGRL LAAGADVTLV GRARIGSELG AHGLTLTDYR GGRWRVPASG
MPYVTDASAA ASAELVLVTV KSAATPSVAD ELKPLLRPGT TVVSFQNGLG NADVLRAALP
QHTVLAGMVP FNVMQPAPGA FHQGTGGELE VAASHALRPF VDDFRRAGLP LMERTDMMAV
QWAKLLLNLN NAVNALANRP LKEQLSQRAY RRCLALAQSE ALRLLTRAGI RPARLTPVPP
AWIPRLLATP DALFARLGGK MLAIDPLARS SMSDDLAAGR ATEVDWINGE VVRLAERLGQ
QAPVNARLCA LVHAAEAAVP RPNWSGPDLL AALRSGA
|
|---|
| |