| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3772 |
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| Symbol | |
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| ID | 8021459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | - |
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| Start bp | 334500 |
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| End bp | 335852 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644832562 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_002983703 |
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| Protein GI | 241665344 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGTCCT CTTCCGTCAC TTCGGTTGCA CCGACGTCAC CTGCGTGGTG GCACCGGCGC
GTGCTGACGC TTGCGTTTCC CATCGTCCTG GCCAACCTGA CGCAGCCGAT CCTGTCCGCC
GTCGATACGG CCGTGGCGGG ACATTTGCCC GGGCCCCAAT TCATCGGCGG TGTGGCGCTG
GGCGGGGTGT TCTTCAACTT CGTGTTCTGG GGCTTCGGCT TCCTGCGCAT GGGCACCACG
GGGCTGGTGT CGCAGGCGCA TGGCGCGGGC GATGCACGTG CGCTGCGGGC GAGCGTGGTA
CGCGCGATGC TGCTCGCGTT TGCCATTGGC GCCGCGCTGG TGGCGCTGCA GGTGCCGGCC
ATCCGTATCA CGCTCTCCCT GCTGGGCGCG AGCGAGTCGG TCACGCGCAT GGCGGAGGTG
TATTGCCACG CGCGGATCTG GTCGGCGCCG TTCGCGCTGG CCAACTACGT CGTGCTGGGC
ACCTTGCTGG GGCGCCAGCA GGTGCGGCGC GCGCTGCTGC TCCAGGTGTT CATCAATACG
GTCAACATGG TGGCCGTGCT GGGCCTCGTT CTGGGGGCCG GCCGCGGCGT GGGCGGCATT
GGCGCGGCCA CGGCACTGGC CGATGTGGCC GGCTTTGCGC TGGGTGCCTT GCTGCTCTGG
CTGCAACGGC CCGTCGGCCT GCCGACGCTC ACCTGGTCAG CGTTGCTTGC AGGTGACGCG
TGGCGCCGGC TGATGGGCCT GAATATCGAC ATCTTCCTGC GCACGCTCTG CCTGCTGGCC
GTCTTCGGCT GGTTTGCCCA CGCCGGCGCC CGGCAAGGCG ACGTGGTGCT GGCCGCCAAT
GCCTTGCTGC TCAACTTCCT GACGTTCATG GCCTATGGGC TCGACGGTTT CGCGCACGCG
GCCGAAGCGC TGGTCGGCGC CGCGCTTGGC GGGCGGGACC GCCACGCCCT GCGCATGGCG
ATTCGTGTCT CGACGTTCTG GTCGGTGCTC GGGGCGGGGG TGTTTGCCGC GGTCTACGCG
GTCGCGGGCC CGGGCATCAT CGGCTTGCTG ACCGATCAGG CGGCCGTGCG CGAGGCGGCG
CGCCAGTACC TCGTCTGGGC GGCGCTGCTG CCCATCGTAT CCGTGTGGGG CTTCCAGTTT
GACGGCGTGT TCATTGGCGC CACGCGCACG CGTGAACTGC TGGTCACGAT GGCCTTGGCC
GCCGTCGCCT TCTGGGGCTT GTCGTTGGGA CTGCAACCAC TGTGGGGCAA CCACGGGCTG
TGGGTCGCCA TGCTGGGCTT CATGGCGCTG CGCGGGCTCA TGCTGGGCGG GCTGCTGTCG
CGGGTGTGGG GCATGGTTCC GCAGGCCGCC TGA
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| Protein sequence | MESSSVTSVA PTSPAWWHRR VLTLAFPIVL ANLTQPILSA VDTAVAGHLP GPQFIGGVAL
GGVFFNFVFW GFGFLRMGTT GLVSQAHGAG DARALRASVV RAMLLAFAIG AALVALQVPA
IRITLSLLGA SESVTRMAEV YCHARIWSAP FALANYVVLG TLLGRQQVRR ALLLQVFINT
VNMVAVLGLV LGAGRGVGGI GAATALADVA GFALGALLLW LQRPVGLPTL TWSALLAGDA
WRRLMGLNID IFLRTLCLLA VFGWFAHAGA RQGDVVLAAN ALLLNFLTFM AYGLDGFAHA
AEALVGAALG GRDRHALRMA IRVSTFWSVL GAGVFAAVYA VAGPGIIGLL TDQAAVREAA
RQYLVWAALL PIVSVWGFQF DGVFIGATRT RELLVTMALA AVAFWGLSLG LQPLWGNHGL
WVAMLGFMAL RGLMLGGLLS RVWGMVPQAA
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