Gene Rpic12D_3771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3771 
Symbol 
ID8021458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp333898 
End bp334494 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content67% 
IMG OID644832561 
Producttranscriptional regulator, XRE family 
Protein accessionYP_002983702 
Protein GI241665343 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.471902 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAAG CCCCCGCCAC CGATGCGCTC GCCGGCGGCC CGCCCGCCGT GGGTGCCAAG 
CTGCAGGCAC TGCGCCAGGC GCGCAAGCTG TCGCTCGATG AACTGTCGCG CCATGCGGGC
GTATCGAAGT CGATGCTTTC GCAGGTCGAG CGCAATCTCG CCAATCCGAC CGTCGCCGTG
CTATGGCGGC TGGCAACCGC GTTGGGCGTG AGCCTGGCCG ACTTCCTGTC GCCCGAGAGC
GCGGCGGATG CGGCCCCTGC GGTGACGGTC ATCCCCGCTC ACTCCATCCC AGTCATCAAA
AGCCCGGATG GCAAGTGCGA ATTGAAGATT CTTGGCCCCG TGGACCTGGC GGCGCGCTTC
GAGTGGTATG AACTGGCGAT CCAGCCAGGC GGGATGCTGG CCTCGGAGCC GCATGAACTG
GGGGCGAAGG AGCATCTGTC GGTCCTGAAC GGCACGGTGA CGGTGCAGTC GGGCCCGAGC
GAGAAGAAGG TGCGTCACGG CGAGACCGCG CGCTACCCGG TGGATGTGCA GCACGCCATT
TCCAACGCCG GCAAGACCGT CGCGACGGCG TTGCTGGTGG TGGAATATGC GCAGTGA
 
Protein sequence
MAQAPATDAL AGGPPAVGAK LQALRQARKL SLDELSRHAG VSKSMLSQVE RNLANPTVAV 
LWRLATALGV SLADFLSPES AADAAPAVTV IPAHSIPVIK SPDGKCELKI LGPVDLAARF
EWYELAIQPG GMLASEPHEL GAKEHLSVLN GTVTVQSGPS EKKVRHGETA RYPVDVQHAI
SNAGKTVATA LLVVEYAQ