| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3760 |
|---|
| Symbol | |
|---|
| ID | 8021447 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012857 |
|---|
| Strand | - |
|---|
| Start bp | 316387 |
|---|
| End bp | 316935 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644832550 |
|---|
| Product | GCN5-related N-acetyltransferase |
|---|
| Protein accession | YP_002983691 |
|---|
| Protein GI | 241665332 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1247] Sortase and related acyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTCCC CGCGACCGAA CGACGACATC CGCCTGATCG ACTGCAACGA GGCCGAACAC
GCATCGGCCA TCCTGGATAT CCTCAACGAG GCGATCGTCA ATTCCACCGC GCTGTATGAC
TACGTCCCAC GGCCGCCGCA GGCCATGCAG GTGTGGTTTG CCGCCAAGCG CGCGGGCGGG
TTTCCGGTCG TCGGCGCAGT CGACGCCTCG GGCCGCCTGC TTGGCTTCGC CAGCTGGGGC
ACGTTCCGCG CGTTCCCGGC CTACAAGTAC ACGGTGGAGC ACAGCGTGTA CGTGCACCAC
AGCAGCCGCG GGCGCGGACT GGGCGAACGT CTGCTGCAAG AGTTGATCCG GCGCGCGCAG
GCGGCGCAGG TCCATGTGCT GGTCGGCTGC ATCGACGCGG CCAATGCAGG GAGCGTCGCG
TTGCACACCC GGCTGGGGTT TGTGCACGCT GGGACGATCA AGGAGGCTGG GTTCAAGTTC
GGGCGCTGGC TGGATGCCGC GTTCTACCAG CTCAATCTCG CGACACCCGA ACATCCTGTG
GACGGCTGA
|
|---|
| Protein sequence | MPSPRPNDDI RLIDCNEAEH ASAILDILNE AIVNSTALYD YVPRPPQAMQ VWFAAKRAGG
FPVVGAVDAS GRLLGFASWG TFRAFPAYKY TVEHSVYVHH SSRGRGLGER LLQELIRRAQ
AAQVHVLVGC IDAANAGSVA LHTRLGFVHA GTIKEAGFKF GRWLDAAFYQ LNLATPEHPV
DG
|
|---|
| |