Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3757 |
Symbol | |
ID | 8021444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | - |
Start bp | 312674 |
End bp | 315058 |
Gene Length | 2385 bp |
Protein Length | 794 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644832547 |
Product | CheA signal transduction histidine kinase |
Protein accession | YP_002983688 |
Protein GI | 241665329 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTATTC GTCATCGGAT TACGTTGCTG GTGGTGCTGA TGTTCGTGGC GCTGGCCGCC ATTGGCGGCT ATGCCGTACA CCAGACGCGG GGCAGCGCGA TGGAAGTCAG GCAGGTGACC GAGGGGGTGG TACCGAGCGC GTTGGCATCG GCCGACCTCG TCTCTCTGGT CAAGGACGTG CAGCTCGCGA CGATGGTTCT GGTCTATGCG CCCGATGACA ACATCGTGAC GCAGGCCAAG CAGGACCTGA AGGCCAAGGA AGCCGCGTTG CGCGCGGCGC TGGACGTGCA GGCCAAGGGC GCCAACGGCC ATGCGCAGGA AGGGCTCGTC ACACAAGCGA AGGAGTCGGT CGACAGCTAT GTCGAGGCCA TCGAGCAAAC CACCGACATG AAGCTGGCGG GCAAGAACGA ACTCGCCCAG GCGTTCCTGT TTGCCAATGT GGCCAGCTAC CGCGACGTGC TCGAAAAGAT CGTCGAGACG CTGCGCATCG AGAAAAACCG CGAGAAGGAC GGGGCCATCA CCGCGCTGAA CGGCAAGCTT GCCACCACCA CCACCGCGAT CGGCGTGGTG AGCGGCGTGG CCATCGTCGT GCTCACGGCC ATTGGCATGC TGCTGTACCG CCAGATCACG CGGCCGCTCA CGCGCATGCA GGCCGAGATG AGCGAAATTG CCACCAGCCA GGATTTCACG CGCCGCGTGC CGGTGGGGCG CATGGATGAG ATTGGGCGCT CGGTGGTGGC ATTCAACCAG ATGATCGAGA AGATCCAGGA AAACTCCGCG CTGCTCAAGC AGAAGACGGC CGACATCCAG GCGATGCTGC AGAACATGCA GCAAGGCATT CTGACCGTGG TGGATGGCAG CCGCGTGCAC GAGGAGTATT CGATCTACCT CGAATCGATC TTCGAGACGC AGGACATCGC CGGGCGTGGC CTGATGGAGC TGGTGTTTGC CGATACCGCA CTCGGTGCCG ATGCGTTGTC ACAGGTGGAG GCGGCGGTCG ACGCGTGCCT GGGGCAGGAC GTCATCAACT TCGCCTTCAA TCAGCATCTG CTGGTGAGTG AAGTCGAGAA GCGCATGCCT GATGGCCGGG TGAAGACGCT CGATCTGTCG TGGTCGGCCA TCACTGACGA GAGTGATACG ATCCTGCGGC TGATGCTGTG CGTGCGCGAC GTCACCGAAC TGCGCAAGCT GGCGGCTGAA GCCAGCGAAC AGCGCCGCAA CCTTGAGATC ATCGGCGAGA TCCTTGCGGT GAGCCAGGAG AAGTTCCAGC ACTTCATCGA CAGCTCCACC ACGTTCGTGC ACGAGAACGA ACGGATCATT CGCCAGTACT CGGAGGCGGA CAACGCTGCC ATCGCTGCGC TCTTCCGCAA CATGCACACC ATCAAGGGCA ATGCGCGCAC GTACAACCTG CAGTATCTGA CCAACGTCGT GCACGAGACG GAGCAGACCT ACCACGCCCT GCGCGAGCCC GGTAGCGAGC ACACGTGGGA CCAGGACTGG CTGATGCAGG AACTCACCCG CGTGCGCGAA GCCATCGAAA GTTACGCGCG CATCAATGAA GTCAAGCTGG GCCGCAAGAG CACGCCAATG GCGGGTGCCG GCGAGCAGCC CACGTCCGAC GCGCTGGTGC GCATTCAGCA ATGCCTGCGC CTGCTGGAAT CGGCCAACCC GGCAAGCGTG CATGAACTCG TTTCGATGCG GGATGCCGTC TATCAGCGGC TTCGCCTGCT GGGCAGCGAG CGCGTGGAAG ACATGCTCTC GGGAGTCCTG CAGTCGCTGC CCTCGCTGGC GCAGGAGCTG GGTAAGGCAC CGGTGACCCT CTGCATCGGC GATAACGGCT ATCGCATCCG CACGGAAGTG CGTGACGTGC TGCAGAACGT CTTCACGCAT CTGCTGCGCA ATGCCATCGA CCACGGCATC GAGACTGCCG ATGTGCGCAT CGCGCATGGC AAGCCTGCAG CCGGGGTCAT CGACATGGAA GTCGGGGTCG ATCAGGGCAT GCTTCAGATC ACGCTGTGCG ATGACGGCCG GGGCCTTGCG CTCGACCGCA TCCGTAGCAT CGCCGTTGAA CGTGGCTGGA TTGGCGCCGC CGAGCGCCCC GGCGATGAAG AGATCGCGCA GTACATCTTC CGCCCGGGTT TCTCGACCGC AGACAAGGTG ACGGAGGTGT CCGGGCGCGG TGTCGGCATG GACGCCGTCG TCGAGTTTCT CAAGCGCGAG CAGGGCCGCA TCGCCTTGCG CTTTACCGAT GACCGGAAGG GCGCCGCTTT CCGCCAGTTC CAGACGGTGG TCTGCCTGCC GGAACGGTTT GCGGTCGACA GCGTGAGAAC GACCCTCGGC AGCGAGCCGC TGGTCAGCAT GGATCTGGAT GAGGAAGCCC TGTGA
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Protein sequence | MTIRHRITLL VVLMFVALAA IGGYAVHQTR GSAMEVRQVT EGVVPSALAS ADLVSLVKDV QLATMVLVYA PDDNIVTQAK QDLKAKEAAL RAALDVQAKG ANGHAQEGLV TQAKESVDSY VEAIEQTTDM KLAGKNELAQ AFLFANVASY RDVLEKIVET LRIEKNREKD GAITALNGKL ATTTTAIGVV SGVAIVVLTA IGMLLYRQIT RPLTRMQAEM SEIATSQDFT RRVPVGRMDE IGRSVVAFNQ MIEKIQENSA LLKQKTADIQ AMLQNMQQGI LTVVDGSRVH EEYSIYLESI FETQDIAGRG LMELVFADTA LGADALSQVE AAVDACLGQD VINFAFNQHL LVSEVEKRMP DGRVKTLDLS WSAITDESDT ILRLMLCVRD VTELRKLAAE ASEQRRNLEI IGEILAVSQE KFQHFIDSST TFVHENERII RQYSEADNAA IAALFRNMHT IKGNARTYNL QYLTNVVHET EQTYHALREP GSEHTWDQDW LMQELTRVRE AIESYARINE VKLGRKSTPM AGAGEQPTSD ALVRIQQCLR LLESANPASV HELVSMRDAV YQRLRLLGSE RVEDMLSGVL QSLPSLAQEL GKAPVTLCIG DNGYRIRTEV RDVLQNVFTH LLRNAIDHGI ETADVRIAHG KPAAGVIDME VGVDQGMLQI TLCDDGRGLA LDRIRSIAVE RGWIGAAERP GDEEIAQYIF RPGFSTADKV TEVSGRGVGM DAVVEFLKRE QGRIALRFTD DRKGAAFRQF QTVVCLPERF AVDSVRTTLG SEPLVSMDLD EEAL
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