Gene Rpic12D_3757 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3757 
Symbol 
ID8021444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp312674 
End bp315058 
Gene Length2385 bp 
Protein Length794 aa 
Translation table11 
GC content63% 
IMG OID644832547 
ProductCheA signal transduction histidine kinase 
Protein accessionYP_002983688 
Protein GI241665329 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0643] Chemotaxis protein histidine kinase and related kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTATTC GTCATCGGAT TACGTTGCTG GTGGTGCTGA TGTTCGTGGC GCTGGCCGCC 
ATTGGCGGCT ATGCCGTACA CCAGACGCGG GGCAGCGCGA TGGAAGTCAG GCAGGTGACC
GAGGGGGTGG TACCGAGCGC GTTGGCATCG GCCGACCTCG TCTCTCTGGT CAAGGACGTG
CAGCTCGCGA CGATGGTTCT GGTCTATGCG CCCGATGACA ACATCGTGAC GCAGGCCAAG
CAGGACCTGA AGGCCAAGGA AGCCGCGTTG CGCGCGGCGC TGGACGTGCA GGCCAAGGGC
GCCAACGGCC ATGCGCAGGA AGGGCTCGTC ACACAAGCGA AGGAGTCGGT CGACAGCTAT
GTCGAGGCCA TCGAGCAAAC CACCGACATG AAGCTGGCGG GCAAGAACGA ACTCGCCCAG
GCGTTCCTGT TTGCCAATGT GGCCAGCTAC CGCGACGTGC TCGAAAAGAT CGTCGAGACG
CTGCGCATCG AGAAAAACCG CGAGAAGGAC GGGGCCATCA CCGCGCTGAA CGGCAAGCTT
GCCACCACCA CCACCGCGAT CGGCGTGGTG AGCGGCGTGG CCATCGTCGT GCTCACGGCC
ATTGGCATGC TGCTGTACCG CCAGATCACG CGGCCGCTCA CGCGCATGCA GGCCGAGATG
AGCGAAATTG CCACCAGCCA GGATTTCACG CGCCGCGTGC CGGTGGGGCG CATGGATGAG
ATTGGGCGCT CGGTGGTGGC ATTCAACCAG ATGATCGAGA AGATCCAGGA AAACTCCGCG
CTGCTCAAGC AGAAGACGGC CGACATCCAG GCGATGCTGC AGAACATGCA GCAAGGCATT
CTGACCGTGG TGGATGGCAG CCGCGTGCAC GAGGAGTATT CGATCTACCT CGAATCGATC
TTCGAGACGC AGGACATCGC CGGGCGTGGC CTGATGGAGC TGGTGTTTGC CGATACCGCA
CTCGGTGCCG ATGCGTTGTC ACAGGTGGAG GCGGCGGTCG ACGCGTGCCT GGGGCAGGAC
GTCATCAACT TCGCCTTCAA TCAGCATCTG CTGGTGAGTG AAGTCGAGAA GCGCATGCCT
GATGGCCGGG TGAAGACGCT CGATCTGTCG TGGTCGGCCA TCACTGACGA GAGTGATACG
ATCCTGCGGC TGATGCTGTG CGTGCGCGAC GTCACCGAAC TGCGCAAGCT GGCGGCTGAA
GCCAGCGAAC AGCGCCGCAA CCTTGAGATC ATCGGCGAGA TCCTTGCGGT GAGCCAGGAG
AAGTTCCAGC ACTTCATCGA CAGCTCCACC ACGTTCGTGC ACGAGAACGA ACGGATCATT
CGCCAGTACT CGGAGGCGGA CAACGCTGCC ATCGCTGCGC TCTTCCGCAA CATGCACACC
ATCAAGGGCA ATGCGCGCAC GTACAACCTG CAGTATCTGA CCAACGTCGT GCACGAGACG
GAGCAGACCT ACCACGCCCT GCGCGAGCCC GGTAGCGAGC ACACGTGGGA CCAGGACTGG
CTGATGCAGG AACTCACCCG CGTGCGCGAA GCCATCGAAA GTTACGCGCG CATCAATGAA
GTCAAGCTGG GCCGCAAGAG CACGCCAATG GCGGGTGCCG GCGAGCAGCC CACGTCCGAC
GCGCTGGTGC GCATTCAGCA ATGCCTGCGC CTGCTGGAAT CGGCCAACCC GGCAAGCGTG
CATGAACTCG TTTCGATGCG GGATGCCGTC TATCAGCGGC TTCGCCTGCT GGGCAGCGAG
CGCGTGGAAG ACATGCTCTC GGGAGTCCTG CAGTCGCTGC CCTCGCTGGC GCAGGAGCTG
GGTAAGGCAC CGGTGACCCT CTGCATCGGC GATAACGGCT ATCGCATCCG CACGGAAGTG
CGTGACGTGC TGCAGAACGT CTTCACGCAT CTGCTGCGCA ATGCCATCGA CCACGGCATC
GAGACTGCCG ATGTGCGCAT CGCGCATGGC AAGCCTGCAG CCGGGGTCAT CGACATGGAA
GTCGGGGTCG ATCAGGGCAT GCTTCAGATC ACGCTGTGCG ATGACGGCCG GGGCCTTGCG
CTCGACCGCA TCCGTAGCAT CGCCGTTGAA CGTGGCTGGA TTGGCGCCGC CGAGCGCCCC
GGCGATGAAG AGATCGCGCA GTACATCTTC CGCCCGGGTT TCTCGACCGC AGACAAGGTG
ACGGAGGTGT CCGGGCGCGG TGTCGGCATG GACGCCGTCG TCGAGTTTCT CAAGCGCGAG
CAGGGCCGCA TCGCCTTGCG CTTTACCGAT GACCGGAAGG GCGCCGCTTT CCGCCAGTTC
CAGACGGTGG TCTGCCTGCC GGAACGGTTT GCGGTCGACA GCGTGAGAAC GACCCTCGGC
AGCGAGCCGC TGGTCAGCAT GGATCTGGAT GAGGAAGCCC TGTGA
 
Protein sequence
MTIRHRITLL VVLMFVALAA IGGYAVHQTR GSAMEVRQVT EGVVPSALAS ADLVSLVKDV 
QLATMVLVYA PDDNIVTQAK QDLKAKEAAL RAALDVQAKG ANGHAQEGLV TQAKESVDSY
VEAIEQTTDM KLAGKNELAQ AFLFANVASY RDVLEKIVET LRIEKNREKD GAITALNGKL
ATTTTAIGVV SGVAIVVLTA IGMLLYRQIT RPLTRMQAEM SEIATSQDFT RRVPVGRMDE
IGRSVVAFNQ MIEKIQENSA LLKQKTADIQ AMLQNMQQGI LTVVDGSRVH EEYSIYLESI
FETQDIAGRG LMELVFADTA LGADALSQVE AAVDACLGQD VINFAFNQHL LVSEVEKRMP
DGRVKTLDLS WSAITDESDT ILRLMLCVRD VTELRKLAAE ASEQRRNLEI IGEILAVSQE
KFQHFIDSST TFVHENERII RQYSEADNAA IAALFRNMHT IKGNARTYNL QYLTNVVHET
EQTYHALREP GSEHTWDQDW LMQELTRVRE AIESYARINE VKLGRKSTPM AGAGEQPTSD
ALVRIQQCLR LLESANPASV HELVSMRDAV YQRLRLLGSE RVEDMLSGVL QSLPSLAQEL
GKAPVTLCIG DNGYRIRTEV RDVLQNVFTH LLRNAIDHGI ETADVRIAHG KPAAGVIDME
VGVDQGMLQI TLCDDGRGLA LDRIRSIAVE RGWIGAAERP GDEEIAQYIF RPGFSTADKV
TEVSGRGVGM DAVVEFLKRE QGRIALRFTD DRKGAAFRQF QTVVCLPERF AVDSVRTTLG
SEPLVSMDLD EEAL