Gene Rpic12D_3744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3744 
Symbol 
ID8021431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp302045 
End bp302962 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content70% 
IMG OID644832534 
Producttranscriptional regulator, LysR family 
Protein accessionYP_002983675 
Protein GI241665316 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGCT TTGACGATCT GTACCTTTTT ACGCGCGTGG TAGAGGCCGG CGGCTTTTCC 
GCTGCCGAGC GCGCCACCGG CATCCCCAAG TCGCGCCTGA GCCGCCGCGT TGCCGAGCTC
GAGACGCAAC TCGGTACGCG GCTGCTGCAC CGCTCGAGCC ATCGCGTGTC GGTTACGCCG
GTGGGGGAAG CGGTCTATCG GCATGCGCGC GAGATGGCCG ATGCCTCCGC TGCCATCGAA
GCGCTGGCGG GCGCCGCACG CAGCGAGCCG GCCGGTGTGC TGCGGGTCGG CACATCGCCA
TTGCTGGCCG AAACGCTGCT CGCCCGCTGG CTGGCCGAGT TTGCTGACTC CCATCCGAAG
CTGCGCATCG AGCTGGATCT GTCCAACACC TATGTCGACC TGATCGAGCA GCGCATCGAT
GTGGCCATCC GCGCGGCAAC GGGGCCGCTG CCCTCGCGCG AGGTGGTGGC GCGCCACCTG
GCGGTCTCGC CGCGCGTATT GGTGGCAAGC CCCGCCCTGG TCGCACGGGT GGGTGAGCCG
GCTACGCCTG CCGACCTGGA AAACACCCCG TGCCTCGGCC AGGGCGCGCT CACGCGTTGC
CGCGACTGGG TGCTGCTCGA CGCGCGCGGT CACCGCATGG TGTTGCCGAT TCGGCCCCGC
TTTGCCGCCG ACAACCTCCT CGCGCTGCGC GAGGCTGCCA TTGCGGGGCT CGGGCTTGCC
ATCCTGCCGC AACACTGCTG CCACGCGGCG CTTGGCGAGG GTCGCCTGCG CACAGTCCTG
CCGGGATGGA CGCCCGAGCC GGCCGACCTG CACGCGTTGT ATCCATCGCG CACGGGCGTC
CCCCCTTCCG TAAAGGCGCT CGTCGCATTC CTGCGCGAGC GCTTCGCGGC TGAAGCCACC
ATGCGGCCGA TCGCCTGA
 
Protein sequence
MKRFDDLYLF TRVVEAGGFS AAERATGIPK SRLSRRVAEL ETQLGTRLLH RSSHRVSVTP 
VGEAVYRHAR EMADASAAIE ALAGAARSEP AGVLRVGTSP LLAETLLARW LAEFADSHPK
LRIELDLSNT YVDLIEQRID VAIRAATGPL PSREVVARHL AVSPRVLVAS PALVARVGEP
ATPADLENTP CLGQGALTRC RDWVLLDARG HRMVLPIRPR FAADNLLALR EAAIAGLGLA
ILPQHCCHAA LGEGRLRTVL PGWTPEPADL HALYPSRTGV PPSVKALVAF LRERFAAEAT
MRPIA