Gene Rpic12D_3743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3743 
Symbol 
ID8021430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp300444 
End bp301706 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content65% 
IMG OID644832533 
Productbeta-lactamase 
Protein accessionYP_002983674 
Protein GI241665315 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATGA AACGTGGGCA GGCGCAGGGC ATGTCCCGCG ATCGGCTCGA TCGGGTCGGC 
CGTTTCATCG ACGATGCGTA CATCGCACCC GGCAAACTGC CGGGTGCCCT CGTCCAGGTC
TGGCGGCGTG GCGAGCGGGT GCTGAACGCC GTGCTCGGTC AGGCCGACCG CGAGCGCCAG
GTGCCGCTGA CCGAGGATGC GATCTTCCGC ATCTACTCGA TGACCAAGCC CATCACGTCG
GTCGCGTTCA TGATGCTGGT GGAGGAATGC AAGGTCGCAC TCGATGACCC CGTCAGCAAA
TTCATCCCGG CATGGCAAAA CCTGGGCGTG TATGCGGGCG GCTTCATGGA GAGCTTCCAG
ACGAGCCCGG CGGCGCGGCC GATGCGCATG GTCGACCTGC TGCGCCATAC CTCGGGCCTG
ACTTACGGCT TTCACCAGAA CACCAACATC GACGCGGCAT ATCGCCGGCT GAAACTCGGT
GACATCGCCA CCGCCGGTAC GCTCGACGAC ATGATCGACA AGCTCGCGGG CTTGCCGCTG
GAGTTCTCGC CCGGCGAGGC GTGGAACTAC TCCGTCTCCA CCGACGTGCT CGGCTATCTG
GTCGGCAAGA TCAGCGGCAT GCCGTTCGAG ACCTTCCTGA AGGAACGGAT ATTCGATCCG
CTGGGCATGG TCGATACGGC CTTCTACGTG CCGGAAGACA AGGCATCACG CCTGTGCGCC
TGCTACGCCG TCGGGTCGCT CGGCTCGAAG GTGGTGGCCG AGCGGCCGGC CTTGCAGGAC
GATCCGCGCA CCAGTGTCTA CCTCAAGCCG CCAAGCTTTG TTTCGGGCGG GGGCGGCCTC
GTGTCCACCG CAGCAGATTA CCTGCGCTTT GCTCGCATGC TGCTGCAAGG CGGTGAGCTC
GATGGCGTGC GCCTGCTGGG TCCGAAGACG CTGGAGCTGA TGACCGCCAA CCACCTGCCC
GGCGGGGCGG ACATCTCCAG CATGTCGCGG CACTCCATGT TCAGCGAAGC CGCTTACGAC
GGCGTCGGAT TCGGGCTCGG CTTTGCGACC ACGGTGGCAC AGCCCGCAAC GCTGATCCCG
GGCAGCACGG GCGATTTCTT CTGGGGCGGT GCGGCTGGCA CGTTCTTCTG GGTCGACCCA
CGGGAAGACC TGATCGGCCT GTTCCTGACG CAGGTGCTGC CGTCATCGGC GTACCCGGTA
CGCCGGCAAC TGCGTACGTT GGTCTACAGC GCGATCACGG AGTCGGAGGG GGGCGCGCGC
TGA
 
Protein sequence
MDMKRGQAQG MSRDRLDRVG RFIDDAYIAP GKLPGALVQV WRRGERVLNA VLGQADRERQ 
VPLTEDAIFR IYSMTKPITS VAFMMLVEEC KVALDDPVSK FIPAWQNLGV YAGGFMESFQ
TSPAARPMRM VDLLRHTSGL TYGFHQNTNI DAAYRRLKLG DIATAGTLDD MIDKLAGLPL
EFSPGEAWNY SVSTDVLGYL VGKISGMPFE TFLKERIFDP LGMVDTAFYV PEDKASRLCA
CYAVGSLGSK VVAERPALQD DPRTSVYLKP PSFVSGGGGL VSTAADYLRF ARMLLQGGEL
DGVRLLGPKT LELMTANHLP GGADISSMSR HSMFSEAAYD GVGFGLGFAT TVAQPATLIP
GSTGDFFWGG AAGTFFWVDP REDLIGLFLT QVLPSSAYPV RRQLRTLVYS AITESEGGAR