Gene Rpic12D_3716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3716 
Symbol 
ID8021403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp271302 
End bp271622 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content69% 
IMG OID644832506 
Productanti-sigma-28 factor, FlgM 
Protein accessionYP_002983647 
Protein GI241665288 
COG category[K] Transcription
[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2747] Negative regulator of flagellin synthesis (anti-sigma28 factor) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.452554 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.254374 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAATCA ACCATATCGT CAACAACGCA CCGGCCGCCG TGCCGACCAA GGACGCCACG 
TCCGGGTCGA CGCGTGCCGC GAGCACGACT CCGGCCAGCA CCGCGGCCTC GGGCTCGGCG
CGCCACAGTG GCGACACCCC GTCGCTATCG GTCCAACGCG TCTCGCGCCA GGTGGGCAGC
GGCGACTTCG ACGCCGCGCG CGTCGAGCAG ATCCGCAGCG CCATCCAGAG CGGCACGCTC
AAGATGGACG CCGGCAAGAT CGCCGATGCG GCGCTTTCCG CCGCGCAATC GCTGCTCTCC
ACGCGATCCA AGAAGGTCTG A
 
Protein sequence
MKINHIVNNA PAAVPTKDAT SGSTRAASTT PASTAASGSA RHSGDTPSLS VQRVSRQVGS 
GDFDAARVEQ IRSAIQSGTL KMDAGKIADA ALSAAQSLLS TRSKKV