Gene Rpic12D_3710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3710 
Symbol 
ID8021397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp266199 
End bp266936 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content63% 
IMG OID644832500 
Productflagellar basal-body rod protein FlgF 
Protein accessionYP_002983641 
Protein GI241665282 
COG category[N] Cell motility 
COG ID[COG4787] Flagellar basal body rod protein 
TIGRFAM ID[TIGR02490] flagellar basal-body rod protein FlgF
[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.414142 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCGCT CGATCTACGT ATCGATGACT GGCGTGAAGC ACCTGTTCGA CCAACAGGCG 
GCCAGCGCAA ACAACCTTGC CAACGCCAGC ACCACCGGCT TCAAGGCGCA GATCGATGCG
TTCCATACGG TGGGCGTGCA GGGCGACGGT TCGCCCACGC GCAGCTTCGT GATGGCCTCG
GCCATCGGCA CGGACGTGAC ACCCGGCCCG ATCGAGACCA CCGGTCGTGC GCTGGATGTG
GCCATCGACG GGCAAGGCTA CTTTGCCGTA CAAGCCCCCG ATGGCACCGA GGCCTATACG
CGTGCGGGTA CGTTCCAGCT GAACCCCGAT GGCACCATCG TGACGCTGTC TGGCCAGCCG
GTGATGGGCG ATGGTGGCCC GATCACCCTG CCGCCCAACA CGACGGTGCA GTTCGCCAAG
GACGGCACGG TCAATGCGAT CAGTGCCGAC AACGTGACGC CGCCTGTGTC TCTCGGTCGG
CTGAAGCTGG TCAGCATCGA TCCTTCCAAC CTTGACCGCG GCACCGACGG CCTGTTCCGC
CAGCGCGACG GACAGGATGC CGACGTGAAC GAAAACGTAC GCATCACGCC TGGGGCACTG
GAAGGCAGCA ACGTGAACCT CACCGACTCG CTCGTCAACA TGATCGAGAT TTCGCGCCAG
CTCGAGATGC AGATGAAATC GCTGCAGACG AGCGACACGA ATGCCCAGTC GGCCAATGAA
CTGCTGCGCC ACGCCTGA
 
Protein sequence
MDRSIYVSMT GVKHLFDQQA ASANNLANAS TTGFKAQIDA FHTVGVQGDG SPTRSFVMAS 
AIGTDVTPGP IETTGRALDV AIDGQGYFAV QAPDGTEAYT RAGTFQLNPD GTIVTLSGQP
VMGDGGPITL PPNTTVQFAK DGTVNAISAD NVTPPVSLGR LKLVSIDPSN LDRGTDGLFR
QRDGQDADVN ENVRITPGAL EGSNVNLTDS LVNMIEISRQ LEMQMKSLQT SDTNAQSANE
LLRHA