| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3708 |
|---|
| Symbol | |
|---|
| ID | 8021395 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012857 |
|---|
| Strand | - |
|---|
| Start bp | 264603 |
|---|
| End bp | 265346 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644832498 |
|---|
| Product | flagellar L-ring protein |
|---|
| Protein accession | YP_002983639 |
|---|
| Protein GI | 241665280 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG2063] Flagellar basal body L-ring protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.388309 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATACCC CCCCGGTTTA CTCGCCCACG CACAGCGGCC GCGCTGTGTC CCCGTTGCGG
ATGGTTCGAC TCGCCGTGCT CGGCACGGCC GCCTTGCTGG CCACGGCGTG CGGCATGCTG
CCACCGCCGG CGCCGATCGT GCAGGGCCCG ACCACCGCGC GCCCGCCGAT GCCGGTGATG
GCGCCGCGCC AGAACGGGGC GATCTACCAG GAGGTGGCGT CGGGCAGCGG AGGCTTCCGG
GGCATGTTCG AAGACCGCCG TGCACACATG GTCGGCGACA CCATCACCAT CGTCATCACC
GAGAACACGG CGGCCAGCAA GCAGACCTCC GGCAGCGTCA ACCGCACCGG CAGCATGAGC
GCTTCGGTGC CGACCTTCGC CGGCATGAAC GCGGGCGTGC TGTCGCTGCT CGGTGTGTCG
GCAAGCGACG CCAACAAGTT CGACAGCAAG GGCGCCAATG GCGCGCAGAA CAACTTCACC
GCCACGATCA CCGTGACGGT CGTGGAGGTC CTCTCCAACG GCAACCTGGT GGTGAGCGGC
GAAAAGCAGA TGGCCGTGGG CCAGGGCACC GAGTCGATCA AGTTCTCGGG CGTGGTTAAC
CCCACCACCG TCAACAACCA GAACACCGTG CTGTCCACCC AGGTGGCGGA CGCACGCATG
GAATATCGCG GCACGGGCTA TGTGGCCGAG TCGCAGCAGA TGGGCTGGCT GTCGCGGTTC
TTCCTGACCG TGTCGCCGTT CTGA
|
|---|
| Protein sequence | MHTPPVYSPT HSGRAVSPLR MVRLAVLGTA ALLATACGML PPPAPIVQGP TTARPPMPVM
APRQNGAIYQ EVASGSGGFR GMFEDRRAHM VGDTITIVIT ENTAASKQTS GSVNRTGSMS
ASVPTFAGMN AGVLSLLGVS ASDANKFDSK GANGAQNNFT ATITVTVVEV LSNGNLVVSG
EKQMAVGQGT ESIKFSGVVN PTTVNNQNTV LSTQVADARM EYRGTGYVAE SQQMGWLSRF
FLTVSPF
|
|---|
| |