Gene Rpic12D_3706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3706 
Symbol 
ID8021393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp262372 
End bp263457 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content66% 
IMG OID644832496 
Productflagellar rod assembly protein/muramidase FlgJ 
Protein accessionYP_002983637 
Protein GI241665278 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1705] Muramidase (flagellum-specific) 
TIGRFAM ID[TIGR02541] flagellar rod assembly protein/muramidase FlgJ 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.537792 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0583488 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCGA CCGACCTCAC CGGCCGTCTG GCGCTCGATT CCAAGGGTTT CGAGTCGCTC 
AAGCAGGCGG CGCGTACGGA CCCGACCGGC GCAGCCAAAA CCGTCGCCAA GCAGTTCGAC
GCGATCTTCG TGAACATGAT GCTCAAGCAG ATGCGCGATG CGTCGCCGCA GACTGGGCTG
CTCGATTCGT CGTCGAGCAA GATGTACACG TCGATGCTTG ACCAGCAGCT CTCGCAGACC
ATGGCCGCGC GCGGCGTGGG CGTGGCGGAT CAACTGCTGA AGCAGATGCT GCGCCAGGCC
AACCGAGTGA ACCCGGATGC CGGCGGGCCG GTGAATACAG CCCTGTCGGG CACGACGGCA
ACGAATACCG CACTGCCCGG CGCGGGCGGC TCTGCCACCG ACGCGGCCAA GGCGATCGCG
CGCTCGTCGC TCAACAGCAT GGCGGCATCT GCCGCCTCCG GCGTGGAAGA CGATGGCTCG
GGGATCAGCA CCGTGCCGCG ACCGGGCCTG GAAGCGCGCG TGCAGCGCGC GTTGGCTGCC
CTGCGCAAGC AGGCCGAAGC CGAAAGCAAC ACCGCCAGCG CACCGCCCGA CGTGGATCTG
TCCACCGTGG CATCCGAGCC GCGCGGCGAA CGCATGACGA GCTTCTACAA CAAGCTGATC
GGCCACGCCA CGCAGGCGGC GCAGGAAACG GGGATTCCGG CCAACTTCAT GATCGGCCAC
GCCGCGCTGG AGAGCGGCTG GGGGCGCCGC GAGATCCATG CCAAGGACGG CAGCAACACG
CACAACCTGT TCGGCATCAA GGCTGGCGGA TCATGGACGG GCAAGACGGC CGAGGTGACC
ACCACCGAAT ACATCGGCGG CGTCGCGCAC AAGGTCAAGG AGAAGTTCCG TGCGTACGGC
TCGTATGCGG AAGCCTTCAA GGACTACGCG AACCTGCTGG CCAACAACCC GCGCTACAGC
CATGTCGTGG CGGCGGGCAA CGGCAACGAC GCGGCTTCAT TCGCCAAGGG CCTGCAGCGG
GCGGGCTATG CGACCGATCC GAATTACGCC AACAAGATCA TGGCGGTGCT CAGACAGATC
GTTTGA
 
Protein sequence
MNPTDLTGRL ALDSKGFESL KQAARTDPTG AAKTVAKQFD AIFVNMMLKQ MRDASPQTGL 
LDSSSSKMYT SMLDQQLSQT MAARGVGVAD QLLKQMLRQA NRVNPDAGGP VNTALSGTTA
TNTALPGAGG SATDAAKAIA RSSLNSMAAS AASGVEDDGS GISTVPRPGL EARVQRALAA
LRKQAEAESN TASAPPDVDL STVASEPRGE RMTSFYNKLI GHATQAAQET GIPANFMIGH
AALESGWGRR EIHAKDGSNT HNLFGIKAGG SWTGKTAEVT TTEYIGGVAH KVKEKFRAYG
SYAEAFKDYA NLLANNPRYS HVVAAGNGND AASFAKGLQR AGYATDPNYA NKIMAVLRQI
V