Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3706 |
Symbol | |
ID | 8021393 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | - |
Start bp | 262372 |
End bp | 263457 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644832496 |
Product | flagellar rod assembly protein/muramidase FlgJ |
Protein accession | YP_002983637 |
Protein GI | 241665278 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1705] Muramidase (flagellum-specific) |
TIGRFAM ID | [TIGR02541] flagellar rod assembly protein/muramidase FlgJ |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.537792 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0583488 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACCCGA CCGACCTCAC CGGCCGTCTG GCGCTCGATT CCAAGGGTTT CGAGTCGCTC AAGCAGGCGG CGCGTACGGA CCCGACCGGC GCAGCCAAAA CCGTCGCCAA GCAGTTCGAC GCGATCTTCG TGAACATGAT GCTCAAGCAG ATGCGCGATG CGTCGCCGCA GACTGGGCTG CTCGATTCGT CGTCGAGCAA GATGTACACG TCGATGCTTG ACCAGCAGCT CTCGCAGACC ATGGCCGCGC GCGGCGTGGG CGTGGCGGAT CAACTGCTGA AGCAGATGCT GCGCCAGGCC AACCGAGTGA ACCCGGATGC CGGCGGGCCG GTGAATACAG CCCTGTCGGG CACGACGGCA ACGAATACCG CACTGCCCGG CGCGGGCGGC TCTGCCACCG ACGCGGCCAA GGCGATCGCG CGCTCGTCGC TCAACAGCAT GGCGGCATCT GCCGCCTCCG GCGTGGAAGA CGATGGCTCG GGGATCAGCA CCGTGCCGCG ACCGGGCCTG GAAGCGCGCG TGCAGCGCGC GTTGGCTGCC CTGCGCAAGC AGGCCGAAGC CGAAAGCAAC ACCGCCAGCG CACCGCCCGA CGTGGATCTG TCCACCGTGG CATCCGAGCC GCGCGGCGAA CGCATGACGA GCTTCTACAA CAAGCTGATC GGCCACGCCA CGCAGGCGGC GCAGGAAACG GGGATTCCGG CCAACTTCAT GATCGGCCAC GCCGCGCTGG AGAGCGGCTG GGGGCGCCGC GAGATCCATG CCAAGGACGG CAGCAACACG CACAACCTGT TCGGCATCAA GGCTGGCGGA TCATGGACGG GCAAGACGGC CGAGGTGACC ACCACCGAAT ACATCGGCGG CGTCGCGCAC AAGGTCAAGG AGAAGTTCCG TGCGTACGGC TCGTATGCGG AAGCCTTCAA GGACTACGCG AACCTGCTGG CCAACAACCC GCGCTACAGC CATGTCGTGG CGGCGGGCAA CGGCAACGAC GCGGCTTCAT TCGCCAAGGG CCTGCAGCGG GCGGGCTATG CGACCGATCC GAATTACGCC AACAAGATCA TGGCGGTGCT CAGACAGATC GTTTGA
|
Protein sequence | MNPTDLTGRL ALDSKGFESL KQAARTDPTG AAKTVAKQFD AIFVNMMLKQ MRDASPQTGL LDSSSSKMYT SMLDQQLSQT MAARGVGVAD QLLKQMLRQA NRVNPDAGGP VNTALSGTTA TNTALPGAGG SATDAAKAIA RSSLNSMAAS AASGVEDDGS GISTVPRPGL EARVQRALAA LRKQAEAESN TASAPPDVDL STVASEPRGE RMTSFYNKLI GHATQAAQET GIPANFMIGH AALESGWGRR EIHAKDGSNT HNLFGIKAGG SWTGKTAEVT TTEYIGGVAH KVKEKFRAYG SYAEAFKDYA NLLANNPRYS HVVAAGNGND AASFAKGLQR AGYATDPNYA NKIMAVLRQI V
|
| |