Gene Rpic12D_3704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3704 
Symbol 
ID8021391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp259292 
End bp260251 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content62% 
IMG OID644832494 
Productflagellar hook-associated protein 3 
Protein accessionYP_002983635 
Protein GI241665276 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID[TIGR02550] flagellar hook-associated protein 3 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.218733 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.125395 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGTCA GTACCGCCCA GTTCTTCGCG CTGTCCAGCG CCTCAATGCA GAACACGCAA 
TCGAACCTGC TGACGTTGCA GCAGCAGCTC GCGAGCGGCA TTGCGCTCAA TAGCGCGGGT
GACAACCCGA GCGCGTTTGG CCAGATGGCG CAACTGCAGC AGACGCAGGA CGCCAATGAC
CAATACCAGG TCAACCGTGA CGCAACGGAC GCACGGCTGA CGAACGTCTC GTCGGCGTTG
ACCAACCTGG TGACGACGCT GCAGCAGGGC AAGCAGTCGA TGGTGGGGGC CAACACTTCG
CTGATGACGG ATTCGCAACG CATCGGCGTG CTGGCGCAGG TCAAGCAGCA GTATCAGCAA
TTGCTGTCGA TCGCCAACCA GCGTGATCCG TCGGGCGTGG CGTTGTTCGG CGGTGCCAAC
GGCACGACCG ATCCGTTTGT CAGCTCGGGC GGCTCGGTCC AGTATGTCGG CACCGGCCAG
CCTCCCACGG TGCAGGTCTC GCAGAACATC TCGATGCCGA ATTCGGTCGC GGGCGATTCC
GTGTTCGTGC GCATACCGAA TACCGACCCG GCCAATCCGT CGGCCAATCA GAGCATCTTC
AAGACATACG AAAACCTGAT CACGGCGCTC TCGACCCCGA TCAACGCCGC CACCCAGGCC
ACTGACGTTG CCAGCCTGCA GAAGGCCGTG CAGACGGCGC AGGGCAATCT GGACAATGCC
TATCAGGTCG CACTGCAGGC GCAGGTGACG GTGGGCACGC AGCAGGCGCA GATCACCACG
CTCAACAGCA GCGGCTCGAA CTACGGCGAG CAGTTGAAGG AGCAGATCTC CAAGCTGCAG
TCGGTGGATT ACACGAGCGC CATCTCGCAG TTCTCGCAGC AGCAGGTGTC GCTGCAGGCT
GCGCAGAAGA CGTTTACCGC CATGCAGGGC ATGTCGCTGT TCCAGTACAT CAACCCCTGA
 
Protein sequence
MRVSTAQFFA LSSASMQNTQ SNLLTLQQQL ASGIALNSAG DNPSAFGQMA QLQQTQDAND 
QYQVNRDATD ARLTNVSSAL TNLVTTLQQG KQSMVGANTS LMTDSQRIGV LAQVKQQYQQ
LLSIANQRDP SGVALFGGAN GTTDPFVSSG GSVQYVGTGQ PPTVQVSQNI SMPNSVAGDS
VFVRIPNTDP ANPSANQSIF KTYENLITAL STPINAATQA TDVASLQKAV QTAQGNLDNA
YQVALQAQVT VGTQQAQITT LNSSGSNYGE QLKEQISKLQ SVDYTSAISQ FSQQQVSLQA
AQKTFTAMQG MSLFQYINP