Gene Rpic12D_3696 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3696 
SymbolfabG 
ID8021383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp252079 
End bp252807 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content67% 
IMG OID644832486 
Product3-ketoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_002983627 
Protein GI241665268 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01831] 3-oxoacyl-(acyl-carrier-protein) reductase, putative 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.709144 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGCC GTGTTCTTGT GACAGGCGCA AGCCGCGGCA TCGGCCGCGC CATCGCCTAC 
CAACTTGCGT CTGACGGACT CGACGTCTCG GTGCATTGCC GCAGTGGCCG CAACGAGGCC
GACGCCGTCG TGGCCGACAT CCAGGCGCAG GGCGGCAGCG CGCGCGTGCT GCAGTTCGAC
GTACGCGATC GCCATGCCTG CCGCACGCAA CTCGAAGCCG ATGTGGAAGC GCACGGTGCC
TACTACGGCA TTGTCCTGTG TGCAGGCGTC ACGCGGGACG CTGCGTTTCC CGCGCTGACC
GAAGAGGACT GGGATGTCGT GCTCGAGACC GGCCTGGACG GCTTCTACAA CGTCGTCCAC
CCGCTCACCA TGCCGATGGT CCGCGCCCGC AAGGGTGGGC GCATCGTCAC CATTGCGTCC
GTCTCGGGCG TGATGGGCAA CCGGGGACAG GTCAATTACA GCGCCGCCAA AGCCGGACTG
ATCGGCGCGA CGAAGGCGCT GGCGGTGGAA CTGGCCTCGC GCAGGATCAC CGTCAACTGC
GTGGCGCCGG GGCTGATCGA AACCGAGATG CTGTCGCACG TCGAACACCT GGACCATGCC
CTGCAGACCG TGCCGATGAA TCGTGTGGGC CAGCCGGCAG AAGTCGCCGC GGTGGTCGGT
TTCCTGATGT CGGACGCGGC CTCGTACGTC ACGCGGCAGG TGATTGGCGT CAACGGCGGG
ATGATCTGA
 
Protein sequence
MSRRVLVTGA SRGIGRAIAY QLASDGLDVS VHCRSGRNEA DAVVADIQAQ GGSARVLQFD 
VRDRHACRTQ LEADVEAHGA YYGIVLCAGV TRDAAFPALT EEDWDVVLET GLDGFYNVVH
PLTMPMVRAR KGGRIVTIAS VSGVMGNRGQ VNYSAAKAGL IGATKALAVE LASRRITVNC
VAPGLIETEM LSHVEHLDHA LQTVPMNRVG QPAEVAAVVG FLMSDAASYV TRQVIGVNGG
MI