Gene Rpic12D_3691 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3691 
Symbol 
ID8021378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp246945 
End bp247379 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content64% 
IMG OID644832481 
Productthioesterase superfamily protein 
Protein accessionYP_002983622 
Protein GI241665263 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.36122 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCAC GTGATCTGCC GCCGCTTGTC GCCAGCGCCC GCGTGGAAGT GCCATTCCAC 
GACGTCGACG CCATGGACGT CTGCTGGCAC GGCCACTACC TGAAATACTT CGAAATCGGC
CGCGCCGCCC TGCTGCGCTG CTTTCACTAC GACTACCGGG AGATGCGCGA CTCGGGCTTT
CTGTGGCCCG TGGTCGAAGC GCACCTCAAG TACATCAAGC CGGCCACGTA TGGCCAGCAG
ATCGAGGTGC GCGCCACGCT GATGGAATAC CAAAACCGTC TCAAGATCGG CTACGAGATC
GTCGATTGCG CTTCCGGCAT GCGGCTGACG AAGGGCCACA CCACGCAAGT CGCGGTGTGC
GCGCGTACGG GTGAGCTGCA GTTCGTCTCG CCGCCCGTGA TGGTCGAACG TGTGGAGCGC
GCATGGCCAC GCTGA
 
Protein sequence
MTARDLPPLV ASARVEVPFH DVDAMDVCWH GHYLKYFEIG RAALLRCFHY DYREMRDSGF 
LWPVVEAHLK YIKPATYGQQ IEVRATLMEY QNRLKIGYEI VDCASGMRLT KGHTTQVAVC
ARTGELQFVS PPVMVERVER AWPR