Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3691 |
Symbol | |
ID | 8021378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 246945 |
End bp | 247379 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644832481 |
Product | thioesterase superfamily protein |
Protein accession | YP_002983622 |
Protein GI | 241665263 |
COG category | [R] General function prediction only |
COG ID | [COG0824] Predicted thioesterase |
TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.36122 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGCAC GTGATCTGCC GCCGCTTGTC GCCAGCGCCC GCGTGGAAGT GCCATTCCAC GACGTCGACG CCATGGACGT CTGCTGGCAC GGCCACTACC TGAAATACTT CGAAATCGGC CGCGCCGCCC TGCTGCGCTG CTTTCACTAC GACTACCGGG AGATGCGCGA CTCGGGCTTT CTGTGGCCCG TGGTCGAAGC GCACCTCAAG TACATCAAGC CGGCCACGTA TGGCCAGCAG ATCGAGGTGC GCGCCACGCT GATGGAATAC CAAAACCGTC TCAAGATCGG CTACGAGATC GTCGATTGCG CTTCCGGCAT GCGGCTGACG AAGGGCCACA CCACGCAAGT CGCGGTGTGC GCGCGTACGG GTGAGCTGCA GTTCGTCTCG CCGCCCGTGA TGGTCGAACG TGTGGAGCGC GCATGGCCAC GCTGA
|
Protein sequence | MTARDLPPLV ASARVEVPFH DVDAMDVCWH GHYLKYFEIG RAALLRCFHY DYREMRDSGF LWPVVEAHLK YIKPATYGQQ IEVRATLMEY QNRLKIGYEI VDCASGMRLT KGHTTQVAVC ARTGELQFVS PPVMVERVER AWPR
|
| |