| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3690 |
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| Symbol | |
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| ID | 8021377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | + |
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| Start bp | 245360 |
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| End bp | 246958 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644832480 |
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| Product | Histidine ammonia-lyase |
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| Protein accession | YP_002983621 |
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| Protein GI | 241665262 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2986] Histidine ammonia-lyase |
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| TIGRFAM ID | [TIGR01225] histidine ammonia-lyase
[TIGR01226] phenylalanine ammonia-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.235909 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAAC ACGATCTGAA CATGCCGGCA CAGGAAGGGG CGCGCTCTCG ACTGCCCGCC
GTCGTCATCG GCAACCGCCA CCTGACAATC GAAGACGTCG TAGCCATCGC GCGTGACGCA
CACCCGGTGT CGCTCTGCGC CGATACCGCG TGGCGTGATC GCATCGAGCG CGGAGCGCAG
TTCCTGCGTG AGCGTCTGGC AGCGGGCGCG ACCGTCTACG GAGTCAACAC GGGTTATGGC
GACGCTTGCC AGGTGAGCGT GCCGGCAGCA CTGGTGGAAG CGCTGCCGCT GCAGCTCACG
CGTTACCACG GCTGCGGCAT GGGCCGCCAC CTGGAGCCCG CCGAAACCCT TGCGGTGGTC
GCCGCGCGGT TGAACTCGCT GGCGCACGGC TACTCTGGCG TGCGCCATCT TCTGCTGCAG
CGGCTGGCGG ATCTCATCAA CCACCGCATC CTGCCCCGCA TCCCGGCGGA AGGCTCGGTG
GGCGCGAGCG GCGATCTCAC GCCACTCTCC TACGTGGCAG CGGCGCTCGT GGGCGAGCGG
GACGTCCTGT TTGCCGGACG CCAGCAGCCC GCCGCCGACG CGTGGCAGCA GATCGGTCAC
GCGCCAATCA CGCTGGCGCC GAAGGAGGGA CTCGCCCTGA TGAACGGCAC GGCCGTCATG
ACGGGCCTGG CCTGCCTTGC GTATGCGCGC GCCGAACACC TCATCCGGCT GTCTGCCCGC
CTGACGGCGC TGGCCACGGT GGCGCTCGAC GGCCGCGCCG CGCACTTCCA TCCGACCATC
TTCCACGCCA AGCCGCATGC CGGCCAGGCC GAGGTAGCAG GATGGATCCG CGACGATCTG
GCGCAATGGG ACGACGCATC CGCGCACCGT GTGCAGGACC GCTACTCGAT CCGCTGTGCG
CCGCACGTGA TCGGTGTAGC GCGCGACGCC CAATCGTGGA TCCGCCGCGA CATCGAGAAC
GAACTCAACA GTGCCAACGA CAACCCGCTG GTCGATCCCG ATACGAAGGA GATCCTGCAC
GGCGGTAACT TCTATGGTGG GCACATCGCG TTTGCGATGG ATGCACTCAA GACCGCCGTC
GCCAATCTGG CCGACCTGAT GGACAGGCAG CTCGCGCTTC TGGTGGATGA CAAGTTCAGC
AACGGCCTGC CCCGAAACCT GTCGGGTGCC ACGGCAGAAC GCGCGCCCAT CAACCACGGC
TTCAAGGCGG TACAGATCTC CTCGTCCGCA TGGACGGCAG AGGCGCTCAA GCTGACCATG
CCGGCCAGCG TGTTCTCGCG TTCGACGGAG GCACATAACC AGGACAAGGT CAGCATGGGC
ACGATTGCGG CCCGCGACTG CCTGCGCGTG CTCGAGCTGA CAGAGCAGGT GGCCGCCGCC
CATACGCTTG CAGCGGTGCA GGCGGTGCGA CTGCGCTGCC GGCTGGATCC CTCGATTCAG
GTTCCCGCAC CCGTACAGGC GTTCATCGCG CGCGTGGGGG CGTTGTCCTC GTTCGTGACC
GAAGACCGCC CGCTGGAATC CGACCTGCGC ACCGTCGCGC TCGCCATCGA GCAAGGCCGG
CTCGGCGATG AACAAGGAAG CCACCATGAC CGCACGTGA
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| Protein sequence | MAEHDLNMPA QEGARSRLPA VVIGNRHLTI EDVVAIARDA HPVSLCADTA WRDRIERGAQ
FLRERLAAGA TVYGVNTGYG DACQVSVPAA LVEALPLQLT RYHGCGMGRH LEPAETLAVV
AARLNSLAHG YSGVRHLLLQ RLADLINHRI LPRIPAEGSV GASGDLTPLS YVAAALVGER
DVLFAGRQQP AADAWQQIGH APITLAPKEG LALMNGTAVM TGLACLAYAR AEHLIRLSAR
LTALATVALD GRAAHFHPTI FHAKPHAGQA EVAGWIRDDL AQWDDASAHR VQDRYSIRCA
PHVIGVARDA QSWIRRDIEN ELNSANDNPL VDPDTKEILH GGNFYGGHIA FAMDALKTAV
ANLADLMDRQ LALLVDDKFS NGLPRNLSGA TAERAPINHG FKAVQISSSA WTAEALKLTM
PASVFSRSTE AHNQDKVSMG TIAARDCLRV LELTEQVAAA HTLAAVQAVR LRCRLDPSIQ
VPAPVQAFIA RVGALSSFVT EDRPLESDLR TVALAIEQGR LGDEQGSHHD RT
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