Gene Rpic12D_3684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3684 
Symbol 
ID8021371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp240007 
End bp240813 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content65% 
IMG OID644832474 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_002983615 
Protein GI241665256 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID[TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.72169 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGCA CACTGAGCGC TCGCATCAAC CAGGCTTGGC GCTTGGCTGC GACCGGCCTC 
GCCTTCACGG TCTTCGGCAT CTGCGGGCTG CTGTTTTCCA TCATCGTCTT TCCACTGGCC
TGGCTGTGGC CGCACCGCGC CACGCGCCAG CGCACCGTCA CCTTCGTCAT CCACTGGTTC
TTCCGTGCGC TCGTGCGGGC ACTGCAATGG CTGGGGGTGA TGCGAGTGGA CGTTCAGGGG
GCCGAGCTGT TGCGCCAGGG CGGGCCCGCC ATCGTGGTGG CCAACCACCC CACGTATCTG
GACGTGATGG TGCTGCTGGC GCTCACGCCA TCCGCCTGCT GCGTGGTCAA GAACGCGCAC
TGGAGCAACC CGTGCTTCTG GGGCATCGTG CGGGCGGCCG AATACATCAG CAACGCCGAC
CCCACCCAAC TGGTCGAAGC AGGCGCGCGC CAACTGGCTT CGGGCTACAC CATGATCATC
TTCCCCGAGG GCACGCGCAG CCCCGCCAGG CACCGGTTGC ACCCGTTCTC GCGCGGTTTT
GCCCATATGG CACTGAACGT CGGGGCGCCC ATCCTGCCCG TGCTGATGGA TTGCAACCCG
CCCGCCTTCA CCAAGACCAT GCGCTGGTAC GACGTGCCCC CGCAGGCGTT TTGCATGAAG
GTCGCCGTGC TCGCACCGGT CAGTGTCGCG CAGTATGTGC CCGAGGGCTC GCCTGCCACG
CTGGCGGCGC GTGCGCTGAC CACCGGTATC GAAACCCACA TTACCGACCA CCTTCTGCAA
TATGGATTCC TTGAAGCTCG AAATTAA
 
Protein sequence
MASTLSARIN QAWRLAATGL AFTVFGICGL LFSIIVFPLA WLWPHRATRQ RTVTFVIHWF 
FRALVRALQW LGVMRVDVQG AELLRQGGPA IVVANHPTYL DVMVLLALTP SACCVVKNAH
WSNPCFWGIV RAAEYISNAD PTQLVEAGAR QLASGYTMII FPEGTRSPAR HRLHPFSRGF
AHMALNVGAP ILPVLMDCNP PAFTKTMRWY DVPPQAFCMK VAVLAPVSVA QYVPEGSPAT
LAARALTTGI ETHITDHLLQ YGFLEARN