Gene Rpic12D_3671 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3671 
Symbol 
ID8021358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp227876 
End bp228298 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content67% 
IMG OID644832461 
Productflagellar protein FliS 
Protein accessionYP_002983602 
Protein GI241665243 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1516] Flagellin-specific chaperone FliS 
TIGRFAM ID[TIGR00208] flagellar biosynthetic protein FliS 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGCAG CTCGCCGCGC CATCGGTGCC TACGCGCAAG TCGGCATCGA GACGTCCGTG 
GTGGACGCCA ATCCACACCG TCTGATCGCC ATGCTGTTCG AGGGCGCGCG CGCCGCCATC
AGCATGGCGA GCGCAGCCAT CCAGCGCGGC GACGTGCCTG CCAAGCTGCG CGCGGTCGAC
AAGGCCATTT CGATCATCGG CCAGGGCCTG CAGGCCAGCC TCGACCATCA GCGTGGCGGC
GAGATTGCCG CGCAGCTGAA TGGCTTGTAC GACTACATGC TCCGGCGCCT GCTGCTGGCC
AACGCCACCA ATGACGTTGG CGTCCTCGCC GAGGTCGACG GCTTGCTGGT GCCGCTGCAA
GAGGCCTGGG CCGCGATTGG CCAGCCCGGC GCGGTCAACA GCCACTTGAG CGTTGTGAGC
TGA
 
Protein sequence
MYAARRAIGA YAQVGIETSV VDANPHRLIA MLFEGARAAI SMASAAIQRG DVPAKLRAVD 
KAISIIGQGL QASLDHQRGG EIAAQLNGLY DYMLRRLLLA NATNDVGVLA EVDGLLVPLQ
EAWAAIGQPG AVNSHLSVVS