Gene Rpic12D_3666 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3666 
SymbolfliE 
ID8021353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp224972 
End bp225298 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content60% 
IMG OID644832456 
Productflagellar hook-basal body protein FliE 
Protein accessionYP_002983597 
Protein GI241665238 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1677] Flagellar hook-basal body protein 
TIGRFAM ID[TIGR00205] flagellar hook-basal body complex protein FliE 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0743096 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.625579 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTCT CCAACGCCCA TTCCGTGGTC TCGCTGATGA ACAGCGTGCT GGCGCCGTCC 
ACTGTCGGCG GCAGCACAGC CAGTGGCGAA ACCGGCAAAC CCAGCGTCGA CTTCGGCTCC
GTGCTGAAGT CGTCGCTGGA CCGTGTTGAC GCCTCGCAGC AGAAGGCCGA GGCCATTTCG
CGCAGCTTTG AGATGAGCAA CAACGATGTC GACCTGCATG ACGTGATGCT TTCGCTGCAG
AAGGCCAATA TCGACTTTCA GACTGCCGTG CAGGTGCGCA ACAAGCTGGT GTCGGCGTAC
CAGAGCATCA TGAGCATGTC GGTCTGA
 
Protein sequence
MDLSNAHSVV SLMNSVLAPS TVGGSTASGE TGKPSVDFGS VLKSSLDRVD ASQQKAEAIS 
RSFEMSNNDV DLHDVMLSLQ KANIDFQTAV QVRNKLVSAY QSIMSMSV