Gene Rpic12D_3652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3652 
SymbolfliH 
ID8021339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp211505 
End bp212242 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content69% 
IMG OID644832442 
Productflagellar assembly protein H 
Protein accessionYP_002983583 
Protein GI241665224 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1317] Flagellar biosynthesis/type III secretory pathway protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.526766 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGTC CGCCGATCAT CCCCCGCGAT ACGCTGGTCG AATACCAGCC CTGGGAGCCC 
ACCGACTTTG TGCGCGAGGC CCGGCTTGCT GCCGCTGATG CTGCACCGCC GCCTCCGCCG
CCGGAGCCCG AGGAGCCGCC GATTTCCGAA GAGGAATGGC AGGCCGCCCT GGAAGCCGAG
TTGGCCAACG CCCGTGACGA AGGCCGCCGT GATGGCTTTG CCCAGGGCTT CCAGGACGGT
TTTGAGCAAG GCCGCCGCCA GGGGGAAGAC GATTCCAGGC AGATCGCCGC GCTGATGCAG
TCCGTGCGCG ATGCGGTCGA CCAATTGAAC GGCAGCGTTG CCGACGAACT GGTGGATCTG
GCCCTGCAGC TCGCCCAGCA GTTCCTGCAC GGTGCGCTGC ATGCGCAGCC CGAGCGCATC
GTGCCGCTCG TACGCGAGGT CCTGGGCGAC GCGCCCACGG CGCCCGCGCC CGCCATGCTT
CGCGTGCATG CCGACGATGC CGAACTGATC CGCCAGATGC TGGGGACCGA ACTGGCTGCC
GCAGGCTGGA CGCTCATCGT CGACGCCGCC ATCGAGCGCG GCGGTTGCCG TGTGCAGACC
CGCTTTGGGG AAACCGATGC CACGCTGCAG ACCCGCTGGG CTGAACTGAC GCGCGCGCTG
GGCCGCGATA CCGCGTGGAT CGCCAGCGAG CGCTCCGAAG CCGAGCGCGT GGCGGGAGGA
GCGCTTCATG TCGCTTGA
 
Protein sequence
MPRPPIIPRD TLVEYQPWEP TDFVREARLA AADAAPPPPP PEPEEPPISE EEWQAALEAE 
LANARDEGRR DGFAQGFQDG FEQGRRQGED DSRQIAALMQ SVRDAVDQLN GSVADELVDL
ALQLAQQFLH GALHAQPERI VPLVREVLGD APTAPAPAML RVHADDAELI RQMLGTELAA
AGWTLIVDAA IERGGCRVQT RFGETDATLQ TRWAELTRAL GRDTAWIASE RSEAERVAGG
ALHVA