Gene Rpic12D_3648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3648 
Symbol 
ID8021335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp206570 
End bp207547 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content66% 
IMG OID644832438 
ProductRhodanese domain protein 
Protein accessionYP_002983579 
Protein GI241665220 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0640799 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGATC TGTTTCCCCT GCTCGCCGAA TACGGTGCGT TTGCCGTGTT CCTCAACGTG 
CTGCTCACGC AGGCAGGCGC GCCGTTGCCC GCAGTACCGA CGCTCCTGGT AGGCGGTGCG
CTCACCCTGA ACGGCCCCCT GTTCTTCATG GAGTTGCTGC CCGCCGCCAT CACGGGGGCC
CTGCTCGGCG ACGGCCTGTG GTATCTGGCG GGCAAGCGGT ACGGCCGACA TGTGATGGCC
CTGCTTTGCC GGGTGTCCCT GTCCCCGGAT TCCTGCGTGC GCCGCACGCG CACGCAGTTC
GAGCGTTGGG GCGCGCCGCT GTTGCTGGTT TCAAAGTTTG TGCCGGGTCT GTCGACGGTG
TCGTCGGCGC TGCTGGGCAC CATGCGTACG CCGTTCAGTA CATTCGTGCT CTACAACCTG
GCAGGCTCGG CACTTTGGGC CATCATCTGG CTCATGCTGG GGCGGGTTGC GCACGACAGC
ATCGACCAGG CCCTGCGGCA GCTCGACCTG CTCGGCGCGC GCGCCATCGT GTTGATCCTG
CTGCTGGCAG TCGCCTACGT GACCGTGCGC TGGCTGCAGC GGTGGCGTTT TCGCAAGATG
CTGGAAATGG TGCGCATTTC TCCCGACGAA CTGCATGCGC TCATCGAGTC AGGCGCGGCG
CCGGTCATCG TCGACGTGCG TGCCGACAGT TCGAGGCAAC TGCAGCCGCA ACGCATTCCC
GGGGCGGTCT TGTACGCCAT GTCGAGCCAG CACAACGCGA TCGAGATTGA TGGCCCGGAC
CGCGAGATCG TCATCTACTG CGCCTGCCCC AACGAGGCGT CGGCCGTGGC GGTTGCGCGC
ACCCTCATGA GCCGCGGCTT CAAGCGCGTG CGCCCGCTGC ACGGCGGCAT CGATGCGTGG
ATCGCTCGCG GCTACGGCGT CGAGCACGTC GTTCCGGTAA CCCCGGCAAC ACTGCAAGCT
GCCGAAGCCC GCGCCTGA
 
Protein sequence
MHDLFPLLAE YGAFAVFLNV LLTQAGAPLP AVPTLLVGGA LTLNGPLFFM ELLPAAITGA 
LLGDGLWYLA GKRYGRHVMA LLCRVSLSPD SCVRRTRTQF ERWGAPLLLV SKFVPGLSTV
SSALLGTMRT PFSTFVLYNL AGSALWAIIW LMLGRVAHDS IDQALRQLDL LGARAIVLIL
LLAVAYVTVR WLQRWRFRKM LEMVRISPDE LHALIESGAA PVIVDVRADS SRQLQPQRIP
GAVLYAMSSQ HNAIEIDGPD REIVIYCACP NEASAVAVAR TLMSRGFKRV RPLHGGIDAW
IARGYGVEHV VPVTPATLQA AEARA