Gene Rpic12D_3638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3638 
Symbol 
ID8021325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp199107 
End bp200081 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content65% 
IMG OID644832428 
Productbeta-lactamase domain protein 
Protein accessionYP_002983569 
Protein GI241665210 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGCCG GCCGCATTGA CGAAATGCGC GGCCGGACAC GTCGCACAAG ACACGCCATG 
ACCGCCACCC ACGCCCGCAC GAAGATCGAA CGCGCAGACT TCGGGCGTGT ATCGGTCTTC
TTTGGCGAGA AGAACGGCAA GTACCCCGAT GGCAACCAGG TGCTCATTCG CGGCGCGGAC
ACTCGCGCCG CCTTTGACAC GCCGGTCGTC TCCAACCACA TCGGCGCCGA GTTCGACGCC
ACCGAACTCG TGGTGATGGG CCACGTGCAC GAAGACCACA TGGCGGGCCT GCACCGCTTG
CCGCGCGCGC GCGTGTACGC GCACGAGGCC GACGTGCCGG CACTGCGGAG TTGGGAAGGC
ATGGTCGACA CGTACGGCCT TGATGACGCA CTCGCGCCGC GCATGCTGGA GAAACTCCAA
CGGGAGTTCT TCTATACGCC GCGCCCCGAT GCGCACGGGT ACGTGGATGG CGCGTCGTGG
GATCTTGGCC AGACGCAGGT CCGTGCGCTC CACTTTCCGG GTCACACGGC GGGCCACAGC
GTGCTGCTGA TCGAGCCAGA GGCAGTGGCA TTCATTGGCG ACATCGATCT GACAGGCTTT
GGCCCCTACT ATGGCGATGC CTGTTCGAGC CTGCACGACT TCCGTCGCAG CCTTGCAAGG
CTGCACGAGA TCCCCGCCAA GGTGTGGGTC ACCTCGCACC ATCGCGGCAT CTACACCGAC
CGGGAATCCT TCCTGCGCGA TCTCGCCGCC TACACCGCCA AGCTGAGCGA GCATGAAGCG
CGCCTGCTGG CCATGCTCGA GGAATCGCCC AAGACGCTGG CGCAACTGGT TGAGCAGCGG
TTGCTGTATC CGCCGGGCTA CCAGAATGTG TGGGTGGAGG GCGCGGAGCG CAGAACGATC
TTGCAGCACC TGGCCGAGTT GCTCGCGCAA GGGCGGGTCC TGCAGGACGA CCAAGGCGCC
TATCGGGTGG CTTGA
 
Protein sequence
MHAGRIDEMR GRTRRTRHAM TATHARTKIE RADFGRVSVF FGEKNGKYPD GNQVLIRGAD 
TRAAFDTPVV SNHIGAEFDA TELVVMGHVH EDHMAGLHRL PRARVYAHEA DVPALRSWEG
MVDTYGLDDA LAPRMLEKLQ REFFYTPRPD AHGYVDGASW DLGQTQVRAL HFPGHTAGHS
VLLIEPEAVA FIGDIDLTGF GPYYGDACSS LHDFRRSLAR LHEIPAKVWV TSHHRGIYTD
RESFLRDLAA YTAKLSEHEA RLLAMLEESP KTLAQLVEQR LLYPPGYQNV WVEGAERRTI
LQHLAELLAQ GRVLQDDQGA YRVA