Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3620 |
Symbol | |
ID | 8021307 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | - |
Start bp | 181896 |
End bp | 182606 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644832411 |
Product | 17 kDa surface antigen |
Protein accession | YP_002983552 |
Protein GI | 241665193 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3133] Outer membrane lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGCAA CGAACAGGCC GGCACGCGCC GGCCGCGCTG GGCGGTGGGT GGCAGTGGCG GCGTTGGCCG CCGTGACGGC GGGTCTGACT GGCTGCATGA CCGCGCCCTA TCCGGGATAT GGCGCCGGTT ACGGCGCCGG CTATGCCGCG GGCAGCAGTG CATACGGCAA CAGTGATGGC AGCACGACGT ACAGCACCAC TCCGTACGCC AACGGGTATG ACAGCCGCTA CAACAATGGC TACGGCAGTT ACGATCAGAA TGCGCCGCAG CCTTACCCGC AGCAGCCTTA CCCGTCGCAG CAGCCGGCGC CCGCGTATTC GCAGCCGAAC TATTCACCGT ATCCCGCCAA TGGCGCGCCT GCCTACCAGA CACCGGCGGA TAACCGCTAC GGCGTAGTCG AGCGTATCGA CGTCGTGCCG GTGCGTGGCC AGCCCACTGG CGTGGGGGCC GTGCTCGGCG GCGTCGTGGG CGGCCTCCTT GGTCACCAGG TTGGCGGCGG GCGTGGCAAC ACCGTGGCTA CCATCGGCGG CGCCGTGGCC GGGGCGATGG CCGGCAATGC GGTGGAAGGC AATACTGTGG CTGGGCAGAC CTATCAGGTG ACGCTGCGCC TGAACGATAA CTCCCGCGTC ACGCTCACGC AGAACAATCC CAATGGTCTG CGCCCGGGTG ACCGCGCCCG CATTGAAAAC AACACGGCGG TGCCGTACTA G
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Protein sequence | MQATNRPARA GRAGRWVAVA ALAAVTAGLT GCMTAPYPGY GAGYGAGYAA GSSAYGNSDG STTYSTTPYA NGYDSRYNNG YGSYDQNAPQ PYPQQPYPSQ QPAPAYSQPN YSPYPANGAP AYQTPADNRY GVVERIDVVP VRGQPTGVGA VLGGVVGGLL GHQVGGGRGN TVATIGGAVA GAMAGNAVEG NTVAGQTYQV TLRLNDNSRV TLTQNNPNGL RPGDRARIEN NTAVPY
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