Gene Rpic12D_3608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3608 
Symbol 
ID8021295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp165319 
End bp165846 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content67% 
IMG OID644832399 
Producthypothetical protein 
Protein accessionYP_002983540 
Protein GI241665181 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.965489 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGTGA CGAGCTTTCT GTCATCCCCG CCCACGCTGG CACGCGCCAA CACGCGTGGC 
GTGCGCTCGC GCCTGCGCAG CGTGCGGTGG CTCGTCTCCG TCTGGTGCCT GTTGTTCACC
GTTTCGGTAT TTTCGGCCAC CCACTTTCCG GATGGCCAGG CCGCAGACGA AGCATTGGAG
GCCGTTGACG CCATCATGGA TGATGCGTTC GACGCTGCCC AACCGGTAAC GGTGTCCAAC
CCGCGTTTCG AGCGTGCCGT GAATGCGGTG CTCGGCAAGG CGGCCAAGGC TTCGAGCCAG
TGCTTCAACA TCCAGCATTG GGTTGCACAG GCTCAGGATG CGCCCGACGC GCCGCCCACC
AGCGCAGCGT CCCCCGATCA CCCCAGCGAC GCACCAGAAC TCTGGCTGCC GCCGCCTCCC
ATGGCGTTGA TGCCCGGCTT GCGTGTCGCG CGCGTCCGCG TCTCTCTTCC TCCGTTCCAG
GCTGGCCCCA CGCCGGCCCC CATGCTGCGT CCTCCCGCAC GCGTCTGA
 
Protein sequence
MSVTSFLSSP PTLARANTRG VRSRLRSVRW LVSVWCLLFT VSVFSATHFP DGQAADEALE 
AVDAIMDDAF DAAQPVTVSN PRFERAVNAV LGKAAKASSQ CFNIQHWVAQ AQDAPDAPPT
SAASPDHPSD APELWLPPPP MALMPGLRVA RVRVSLPPFQ AGPTPAPMLR PPARV