| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3606 |
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| Symbol | |
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| ID | 8021293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | - |
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| Start bp | 162642 |
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| End bp | 163862 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644832397 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002983538 |
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| Protein GI | 241665179 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.335838 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.676056 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACGCC CGAGCCATCG CGTTGCCTCC CGAACCCATG AATCCAGCCT CACCATGAAC
GCACCTGCTT CCTTCTCTTC TTCGATCCGG CTGGCCGGCG TTGCCCTTGC AGCGATGTTG
TTGCTTGGCG CCTGCGGCAA AGATGCCGCC AACGATGCCA AGGCCGCGCA ACAGGCCGTC
GACCCGAATC TCGTGGTTGC ACAGCCCACG CTGGTGCAGC GCCTGAAAGT GGCGCCGGTG
GGCAAGCAGC CGATTGCCGA GCGCTTGCGC GTGCCGGGGC AGATCGCGTT TGACGAACAG
CGCGTGGCGC GTATCGGTGC CACCGTCACG GGTCGTGTGA CGGAGCTGGT CGCCACGCCG
GGGCAGAGCG TCAAGGCGGG CGACATCCTC GCGCAACTGC ACAGCACCGA GCTTGGCGCC
GCGCAGCTCG CCTACCAGAA GGCTGCTGCG CAGCGTGATT TGCAGGCGCG TGCGCTGGGA
CGCGCCAAGC TGTTGCTGGC CGCCGACGTG ATCGGCTCGG CCGAACTCCA GAAGCGCCAG
AGCGAACTCG CAATGGCCGA TGCCGAAGTG CGCGCGGCCA TCGACCAGTT GCGCGTGATG
GGCGTATCGC CCGGCACGCT GGCGAAGATG CGCACCGGCG GCATGTCATC GATCTCACCC
GTGGTGGCAA GCATCAGCGG CACGGTGGTG GACCGCAAGG TAACGCGCGG CCAGGTGGTG
CAGCCGGCCG ACGAGCTGTT CACCGTGGCC GATCTGTCGC GCGTGTGGGT GGTGGGTGAA
GTGCCCGAAA ACGCCGCTGC CGGCGTGCGT GCAGGGCAGG CCGTGGAGAT CGACACCGGC
GCGGGCGACC GCATTGTCGG CAAGCTGATC TGGGTGTCGG ACATTGTCGA CCCGCAAACG
CGTACGGTCA CGGTGCGCAC CGAAGTGGAC AACGCAGAGC GCACGCTCAA GCCGTCGATG
CTGGCCACGC TGCTCATCCA GTCGCGCCCG GAAGAGCGCG TGGTGGTGCC GACGTCCGCC
GTGGTGCGTG AAGACAACCG CGACTACGTA TTCGTGCGCG CCAGCGAGAC GAATTACCAG
CTCACACCAG TCAAGCTGGG CGATGAGTCA AACGGTGTGC GCCCGGTCAT TTCCGGCGTG
CAGGCCGGGC AGCCGATCGT CGTTGAAGGC GGCTTCCATC TGAACAATGA GCGCAAGCGC
GCCGAGATGG AGGGCGCATG A
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| Protein sequence | MTRPSHRVAS RTHESSLTMN APASFSSSIR LAGVALAAML LLGACGKDAA NDAKAAQQAV
DPNLVVAQPT LVQRLKVAPV GKQPIAERLR VPGQIAFDEQ RVARIGATVT GRVTELVATP
GQSVKAGDIL AQLHSTELGA AQLAYQKAAA QRDLQARALG RAKLLLAADV IGSAELQKRQ
SELAMADAEV RAAIDQLRVM GVSPGTLAKM RTGGMSSISP VVASISGTVV DRKVTRGQVV
QPADELFTVA DLSRVWVVGE VPENAAAGVR AGQAVEIDTG AGDRIVGKLI WVSDIVDPQT
RTVTVRTEVD NAERTLKPSM LATLLIQSRP EERVVVPTSA VVREDNRDYV FVRASETNYQ
LTPVKLGDES NGVRPVISGV QAGQPIVVEG GFHLNNERKR AEMEGA
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