| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3605 |
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| Symbol | |
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| ID | 8021292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | - |
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| Start bp | 159496 |
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| End bp | 162645 |
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| Gene Length | 3150 bp |
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| Protein Length | 1049 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644832396 |
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| Product | heavy metal efflux pump, CzcA family |
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| Protein accession | YP_002983537 |
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| Protein GI | 241665178 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.584733 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.967685 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGACG CATTGATTCG CGGCGCGCTC AAGCAACGGC TCGTGGTGGC GGTGATTGCC
GCTGTGCTGC TGTTCTTCGG GTTTGACGCC GCACGCAAGC TGTCGCTTGA CGCCTTTCCG
GACGTGACCA ACGTGCAGGT GCAGATTGCT ACGGAGGCGC CGGGGCGCTC ACCCGAAGAG
GTCGAGCGCT TTGTGACCGT GCCGGTGGAA ATGGCGATGA CCGGCCTGCC GGCGCTGACC
GAGATGCGCT CGCTCAACAA GCCGGGCCTG TCGCTCATCA CGCTCGTCTT TACCGACGAG
ACCGATGTGT ACTTCGCGCG CCAGCTTGTG ATGGAGCGGT TGATGGAGGT GCAGTCCCGC
ATGCCAGCGG GTGTGACGCC GGTGCTGGGC CCGGTATCGA CGGGCCTGGG CGAGGTGTAT
CAGTACACGC TCGACAAGCC GGATGACGGC GACAAGGAAC TCTCGGTGGA GGAACTCACC
CAGCGTCGCA TTGCGCAGGA CTGGGTGGTG CGTCCGCTGC TGCGCTCCAT TCCGGGCGTG
GCCGAGATCA ACTCGCAGGG TGGTTACGAG AAGCAGTATC AGGTGCTCGT CAACCCGGAA
CGCCTGCGCC ACCACAACGT GACGGTCAAG CAGGTGTTCG AGGCGCTGGC CGCCAACAAC
GCCAACTCGG GCGGCGGTGT GCTGCCGCAC TTCGCAGAGC AGTACCTGAT TCGCGGCGTG
GGCCTGGTGC GCGACACCAA CGACATTGGC GCCATCGTGC TCAAGGAGGT CAACGGTACG
CCGCTCACGA TCCGCGACGT GGCTGAGGTG AAGATCGGCA CCGCGGTGCG CGCGGGGGCG
GTGGTCAAGA ACGGCGTGAC GGAATCCGTT GGCGGTGTGG TGATGATGAT GCGCGGCGGC
AATGCCAAGG AAGTCGTCGC CCGCATCCAG GACCGCGTCA AGGCCATCAA CAACGACGGC
ATGCTGCCCG ACGGCTTGAA GATCGTGCCG TACTACGAGC GTTCAGAGCT GGTCGATTCA
GCCCTGCAGA CCGTCATCAA GGTGCTGGCT GAAGGCGTGG TACTGGTGGT GATCGTGCTG
CTGCTGTTCC TCGGCGACAT CCGTTCATCG CTCATCGTGG TCGGCACGCT GATCCTCACG
CCGCTGCTGA CGTTCATGGC GATGAACAAG CTCGGCATCT CGGCCAATCT GATGTCATTG
GGAGGCTTGG CCATTGCCAT CGGCTTGATG GTCGATGGCT CGGTGGTCGT GGTGGAGAAC
GCCTTTGCGC ATCTGGCCAA GCCGCGCGAT CCGAACGAGA GCCGCGCGCG TGTGATCCTG
CATGCCGTGA CGGAGGTGGC GACGCCCGTG ATCTTTGGCG TGGGCATCAT CATCCTGGTG
TTCCTGCCGC TGATGACGCT GGAGGGCATG GAGGGCAAGA TGTTTGCGCC GCTGGCCTTC
ACGATTGCGA TTGCACTGTT CTTCTCGCTG GTGCTGTCGC TCACGTTGAC GCCGGTGCTG
TCGTCGTATC TGCTCAAGCC CAAGGCGCAT AAGCACGGTG AGGGTGAGCA CAGCGACGAC
CCACATGCCG AGCACGACGC GCATGACACG TGGCTGATCC GCAAGATGAA GAAGCCGTAT
CTGCGCTTGC TGGAGTTGAG CCTCAACAAC GGCCGCAAGA CCGTCGTCGT GGCCGTGGCC
GTGTTTCTGG CCACCGGTGC GCTGATGCCG TTCCTCGGCA CGGCGTTCAT TCCGGAGATG
AAGGAAGGCT CGGTGGTGCC AGGCATCAAC CGCGCGCCGA ACATCTCGCT GGAAGAGTCG
ATCCGCATGG AGATGGAAGC CATGCGCCTG GTGATGCAGG TGCCGGGCGT GAAGTCGGCC
GTCTCTGGCG TGGGCCGAGG TGAGTCTCCA GCCGATCCGC AGGGCCAGAA CGAGTCGACG
CCGATCGTCT CCCTCAAGCC GCGCGACGAA TGGCCCAAGG GCTGGAATCA GGACGACATT
GCCGAAGCGA TGCGCAAGGC GCTGCAGGTG CTGCCCGGCG TGCAGATCGT CATGGCGCAG
CCGATTTCTG ACCGCGTGGA CGAGATGGTG ACCGGCGTAC GTTCCGACGT GGCCATCAAG
GTGTTCGGCG ACGACCTGAA CACCTTGCGC GAGAAGGCCG AGGCGATTGC CAAGGTGGCG
CAGGGCATCC AGGGTGCGCA GGACATGCGC GTGGAGCGGA TCACCGGTCA GCAGTATCTG
CAGATCGCGA TCGACCGCCA GGCCATTGCG CGCCATGGTC TGAACGCGGC CGACGTGCAC
AACGTGATCG AAACCGCCAT CGGCGGCAAG GAAGCCACGG AGATCTTCGA AGGCGAGCGC
CGCTTCAGCG CGGTGGTGCG CCTGCCGGAC GCATATCGCG GCAGCGTGGA GGCCATCCGC
AACCTGATCG TGGCCGCACC CAATGGCGCA CAGGTGCCGA TGGAGAGCAT CGCCCGCATC
GATGTGACAG ACGGCCCCGC GCAGATCAGC CGCGAGCTGG GCAAGCGCCG CGTGGTGGTG
GGCGTGAACG TGCGCGACCG CGACTTGGGC GGCTTCGTGG CCGAGCTGCA GGCCGCCGTC
GCACAGAAGG TCAAGCTGCC CGAGGGCTAC TACCTGGAAT GGGGAGGCCA GTTCCAGAAC
ATGGAACGCG CCATGGGCCA CCTGAAGGTG ATCGTGCCGA TTACGGTGGC CGCCATCTTC
TTCCTGCTGT TCCTGCTCTT CAACTCGGTG CGCTACGCCA CGCTGATCAT CCTGGTGCTG
CCGTTCGCCT CGGTGGGCGG GATCATCGGC CTGTTTGTCA CGGGTGAGTA CCTGTCTGTG
CCGGCATCGG TGGGTTTTGT GGCGCTATGG GGCATCGCGG TGCTCAACGG CGTGGTGCTG
GTCAGCACGA TCCGCAGTCT GCGCGAGCAG GGCATGTCGG TGGAGGAATC GGTGCGGCTG
GGCTCGCGCA TGCGTTTCCG GCCCGTGATG ATGACGGCCA CGGTGGCCAT GCTGGGCTTG
ATCCCGTTCC TGTTTGCCAC GGGGCCGGGT TCAGAGGTGC AACGGCCGCT GGCCATCGTG
GTGATCGGCG GTCTGTTGAC CTGCACGCTG CTCACGCTGG TGATGCTGCC CACGCTGTAC
AAATGGTTTG ATGAGGAGTC GAAGGCATGA
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| Protein sequence | MIDALIRGAL KQRLVVAVIA AVLLFFGFDA ARKLSLDAFP DVTNVQVQIA TEAPGRSPEE
VERFVTVPVE MAMTGLPALT EMRSLNKPGL SLITLVFTDE TDVYFARQLV MERLMEVQSR
MPAGVTPVLG PVSTGLGEVY QYTLDKPDDG DKELSVEELT QRRIAQDWVV RPLLRSIPGV
AEINSQGGYE KQYQVLVNPE RLRHHNVTVK QVFEALAANN ANSGGGVLPH FAEQYLIRGV
GLVRDTNDIG AIVLKEVNGT PLTIRDVAEV KIGTAVRAGA VVKNGVTESV GGVVMMMRGG
NAKEVVARIQ DRVKAINNDG MLPDGLKIVP YYERSELVDS ALQTVIKVLA EGVVLVVIVL
LLFLGDIRSS LIVVGTLILT PLLTFMAMNK LGISANLMSL GGLAIAIGLM VDGSVVVVEN
AFAHLAKPRD PNESRARVIL HAVTEVATPV IFGVGIIILV FLPLMTLEGM EGKMFAPLAF
TIAIALFFSL VLSLTLTPVL SSYLLKPKAH KHGEGEHSDD PHAEHDAHDT WLIRKMKKPY
LRLLELSLNN GRKTVVVAVA VFLATGALMP FLGTAFIPEM KEGSVVPGIN RAPNISLEES
IRMEMEAMRL VMQVPGVKSA VSGVGRGESP ADPQGQNEST PIVSLKPRDE WPKGWNQDDI
AEAMRKALQV LPGVQIVMAQ PISDRVDEMV TGVRSDVAIK VFGDDLNTLR EKAEAIAKVA
QGIQGAQDMR VERITGQQYL QIAIDRQAIA RHGLNAADVH NVIETAIGGK EATEIFEGER
RFSAVVRLPD AYRGSVEAIR NLIVAAPNGA QVPMESIARI DVTDGPAQIS RELGKRRVVV
GVNVRDRDLG GFVAELQAAV AQKVKLPEGY YLEWGGQFQN MERAMGHLKV IVPITVAAIF
FLLFLLFNSV RYATLIILVL PFASVGGIIG LFVTGEYLSV PASVGFVALW GIAVLNGVVL
VSTIRSLREQ GMSVEESVRL GSRMRFRPVM MTATVAMLGL IPFLFATGPG SEVQRPLAIV
VIGGLLTCTL LTLVMLPTLY KWFDEESKA
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