Gene Rpic12D_3601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3601 
Symbol 
ID8021288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp153923 
End bp154759 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content62% 
IMG OID644832392 
Producthypothetical protein 
Protein accessionYP_002983533 
Protein GI241665174 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.11991 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAACA AGACCCACGA AATCCGCCCC AACCAGTCGA TCGAGCTGCT CAAGGAACTG 
CACATCCTGA CGCGCGACGG CAAGATGAAC CAGGACAGCC GCCGCAAGCT CAAGCAGGTC
TATCACCTGT TCCAGTTCAT CGAGCCGCTG ATGGCCGACG TGCAGCAGAC CAAGGGGCAT
GTCACGCTGG TCGACCACGG CGCGGGCAAG TCGTACCTCG GCTTCATCCT GTACGACCTG
TTCTGCAAGG AACAGCCCGG CGATGGCACC TCGCACATCT ACGGCATTGA AACGCGCGAA
GAGCTGGTCG AAAAGTCCAC CGAACTCGCG GCGCGGCTGG GCTTCAGGGG GATGTCGTTC
CTGAACCTGT CGGTGGCGGA GTCCATCACC TCGGATCGTC TGCCGCCCAC CATCGACATC
GTGACCGCGC TGCATGCCTG CAACACGGCC ACCGACGATG CGATCCGTTT CGCGCTAGAA
AAGCACGCGC AGTACATCGT ACTGGTGCCT TGCTGTCAGG CGGAGGTGGC GGGCGTCCTG
CGCAAGAACA AAAGCAAGTC GCTAGGCAAT GCGCTGACGG AGATCTGGCG CCATCCACTG
CACACACGTG AGTTCGGTAG CCAGGTCACG AACGTGCTGC GCTGCCTGCA GCTCGAGGCC
CACGGCTATC AGGTCAGCGT GACCGAGCTG GTCGGGTGGG AACACTCGAT GAAGAACGAG
CTGATCATCG CCCAGTACAA GGACCTGCCC CGCCGGCGCG CGACGGAGCG GCTGAACGAG
GTCATCAACG CGCTCGGCCT GGAAGAGCTG CACGAACGCT TCTTTGCGCC GGCCTGA
 
Protein sequence
MSNKTHEIRP NQSIELLKEL HILTRDGKMN QDSRRKLKQV YHLFQFIEPL MADVQQTKGH 
VTLVDHGAGK SYLGFILYDL FCKEQPGDGT SHIYGIETRE ELVEKSTELA ARLGFRGMSF
LNLSVAESIT SDRLPPTIDI VTALHACNTA TDDAIRFALE KHAQYIVLVP CCQAEVAGVL
RKNKSKSLGN ALTEIWRHPL HTREFGSQVT NVLRCLQLEA HGYQVSVTEL VGWEHSMKNE
LIIAQYKDLP RRRATERLNE VINALGLEEL HERFFAPA