Gene Rpic12D_3599 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3599 
Symbol 
ID8021286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp151306 
End bp152448 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content67% 
IMG OID644832390 
Productmethyltransferase small 
Protein accessionYP_002983531 
Protein GI241665172 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.653734 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCATC TCCCCACTCT CAGTTGGACC GACGCCGGCT CCGAAACCGA CGCCGAAACC 
CACCACACCG CGTTGTGGCG CTCGGAAGCC GGCAACTCGC CGCCCAAACG CGTCGTCATT
GCGGATGACC GCACCGCCGC CGATACCGCC TATCGCCTGG CATGCGAAGG CACCGCGCTG
CTGTGGCATG GCGACTTCCA GAACGCACGC CAGCTGCTGC AAGCGATGTC GCGCCGCGCC
GATCGCAAGC CACGCAAGAC AGCCGAATCG GCCATCGACG CCTTCAACCT GCACCGCCAG
GCGCAATCGC AGCGCGCGCG CACGCTGGGC ATGCTGCTGA TACCGCTCGA TGCCGACTAC
ACGGTCCCAC TGCGTCGCGC CCCCGACGTG CGCGCAGCCT GCCGTGAGGC ATATGGACCC
AGCGATGCGG CTTCGGTGGT CTCGCTGCGG GAACTCCTCG GTCTGATCGG CGCGCACGAA
TGGCGCAAGA AAGGCGTTGA AATCCCCGCC CTGGGTGGCG GGCGCATCCA CCCGCATTAC
GGCGTGTTCT CGCCCGTGCG CGGCGAATAC ATCGACCTGG TGGCGAACGC GCCGTTGCCG
TCGACAGCGC TGGCATTTGA TATCGGTACC GGCACCGGCG TGCTCGCAGC CGTGCTCGCG
AAACGGGGCG TCAAGCATAT TGTCGCCACC GACCAGGACC CGCGCGCACT GGCGTGTGCC
CGCGACAATC TTGCACACCT CGGGCTCCAG TCGCAGGTGG AGGTGATCGA AGCCGATCTG
TTTCCCGAAG GCCGCGCGCC GCTCATTGTC TGCAACCCGC CTTGGCTGCC AGCCCGGCCC
AGCTCACCCA TCGAACGCGC CGTCTATGAT CCGGACAACC GCATGCTGCG CGGCTTTCTC
GATGGCCTTG CCGCGCATCT GGAGCCTGCT GGCGAAGGTT GGCTGATCCT GTCGGACTTC
GCCGAGCATC TCGGCTTGCG CACGCGTGAT GCACTGATGG CGATGATCGA GGCTGCGGGT
CTGCAGGTCG TTGGCCGCGA AGATATCAAG CCGAAGCACC CGAAGGCGTC GGACCCGAAC
GATCCGCTCC ACCAGGCCCG CGCTGCCGAG GTGACCTCGC TGTGGCGGCT CAAGGCACGC
TAA
 
Protein sequence
MTHLPTLSWT DAGSETDAET HHTALWRSEA GNSPPKRVVI ADDRTAADTA YRLACEGTAL 
LWHGDFQNAR QLLQAMSRRA DRKPRKTAES AIDAFNLHRQ AQSQRARTLG MLLIPLDADY
TVPLRRAPDV RAACREAYGP SDAASVVSLR ELLGLIGAHE WRKKGVEIPA LGGGRIHPHY
GVFSPVRGEY IDLVANAPLP STALAFDIGT GTGVLAAVLA KRGVKHIVAT DQDPRALACA
RDNLAHLGLQ SQVEVIEADL FPEGRAPLIV CNPPWLPARP SSPIERAVYD PDNRMLRGFL
DGLAAHLEPA GEGWLILSDF AEHLGLRTRD ALMAMIEAAG LQVVGREDIK PKHPKASDPN
DPLHQARAAE VTSLWRLKAR