| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3591 |
|---|
| Symbol | |
|---|
| ID | 8021278 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012857 |
|---|
| Strand | - |
|---|
| Start bp | 140242 |
|---|
| End bp | 140910 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644832382 |
|---|
| Product | protein of unknown function DUF161 |
|---|
| Protein accession | YP_002983523 |
|---|
| Protein GI | 241665164 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1284] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.827166 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.342879 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCCC TCGAAGTCAC CCGGCACAGT ACGCTCGAAG ACGTGCTGGC CATCGTCACC
GGCACGCTGT TCGTGTCGCT TGGTATCACG CTGTTCAAGC AGGGCGGCCT GCTCTCGGGT
GGGACGGCGG GCGTGGCCTT CCTGATCCAC TACGCCACGT CGCTGCCGTT CGGCGCCGTG
TTCTTCACGA TCAATCTGCC GTTCTACTAT CTGGCGGTGC GGCGCATGGG CTGGCGCTTT
ACCTGCAAGA CGTTCTGTGC GGTGGCACTG GTGTCGTGGC TCAGCGAGGT GCATGCGCAC
TTCGTGCATC TGGATACGCT CAACCCGCTT TACGCCGGCG CCATTGGCGG CACGCTGATG
GGCGTCGGGC TGATCGTGCT GTTCCGCCAT CAGGCCAGCC TGGGCGGCGT CAACATCGTC
GCGCTGTATC TGCAGGAAAA GTACGGCATT CGCGCAGGCA AGTTCCAGAT GGCGGTGGAC
GTGGGGATCG TGCTGACCTC GCTGTTCGTG GTCAGCCCGA TGGCGTTGGC GGCCTCGCTG
GTGGGCGCGG TGGCATTGAA CCTGAGCATT GCGCTGAACC ACCGGCCTGG CCGCTACCCG
GCTGCGCAGG CTGCCCTTGG CGCCGCGCCC GCAGACCGCC ACGGCCCGCA CAAGCGTTCC
GTGGCGTGA
|
|---|
| Protein sequence | MKALEVTRHS TLEDVLAIVT GTLFVSLGIT LFKQGGLLSG GTAGVAFLIH YATSLPFGAV
FFTINLPFYY LAVRRMGWRF TCKTFCAVAL VSWLSEVHAH FVHLDTLNPL YAGAIGGTLM
GVGLIVLFRH QASLGGVNIV ALYLQEKYGI RAGKFQMAVD VGIVLTSLFV VSPMALAASL
VGAVALNLSI ALNHRPGRYP AAQAALGAAP ADRHGPHKRS VA
|
|---|
| |