| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3589 |
|---|
| Symbol | |
|---|
| ID | 8021276 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012857 |
|---|
| Strand | + |
|---|
| Start bp | 137478 |
|---|
| End bp | 138794 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644832380 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_002983521 |
|---|
| Protein GI | 241665162 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2223] Nitrate/nitrite transporter |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.745266 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.490734 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTCCG CTACTGCCAC CTCTCCTGCC ATTGCGGCGC AAGCCGCCGT CGCGCCTCGC
GCCTATGCGG TGCTCGCGTC CAGTACGTTC GCCTTCACCA TCTGCTTTGC GGTGTGGACG
ATGTTCGCCA TTCTCGGCAT TCCGCTGCAG AAGCAGCTCG GCCTGTCCGA AACCGAGTTC
GGCCTGATAG CGTCCATGCC GGTGCTGACG GGCTCGCTCG TGCGCGTGCC CCTGGGCATG
TGGACAGACC GCTTTGGCGG TCGCATCGTG TTCTTCCTGC TGATGCTCGC CACCGTAGCG
CCCATCTGGT TTGTCGCCGA CGCAACGCAG CTTTGGCAGT TCCTGGCGCT CGGGATGCTG
GTGGGCCTGG CCGGCGGCTC CTTCTCCGTA GGCACGCCGT ATGTGGCGCG CTGGTTCCCC
AAGAAGCGCC AGGGCTTTGC CATGGGCATC TTCGGTGCAG GCAATGCTGG CGCGGCGTTG
AACAAGTTTG TCGCGCCGCT GCTGGTGCTG TCCGCCGGCA CATGGACCGT CGTGCCACGC
GTGTATGCGA TGGCCATGCT CGTGACCGCA CTGCTGTTCT GGTTCGGCTC CGCGACCGAT
CCGTCGCACG CCACGGGCAA GTCGGTGTCG CTGCGCGCGC AGCTGCGCGA AATGCGCGAC
CCCCGCGTCT GGCGCTATGC GCAGTATTAC TCGGTGGTCT TCGGCGGTTA TGTGGGGCTG
TCGCTGTGGC TCACGCGCTA CTACGTCGCG GAATACGGCT TCTCGATCAA GACCGCGGCC
TTCCTGGCAG CCTGTTTCTC CCTGCCGGGC GGCGTGCTGC GCGCGGTGGG CGGCTGGCTG
TCCGACCGTT ACGGCGCCTA TCGCACGACC TGGGCAGTGA TGTGGGTGTG CTGGGTCGCG
TTCTTCCTGC TCAGCTATCC GCAGACCCGG TTCACCATCA CCGGCACCCA CGGCCCGCTG
GACTTCCACA TCGGGCTGTC GCCCGTGGCG TTCACCTCGC TGATGGGCGT GGTGGGTGTG
GCAATGGCCA TCGGCAAGGC GTCCGTCTTC AAGTTCATCT CGAATGACTT CACCGACAAC
ATCGGTGCGG TATCGGGTGC GGTGGGCCTT GCCGGTGGTC TGGCGGGGTT CGTCCTGCCG
ATCCTGTTTG GCGTGCTGGT CGATCTCACG GGCATTCATT CCACCTGCTT CATGTTGCTG
TACGGCGCGG TGTGCGTCAG CCTGGTGTGG ATGCACTTCA GCTTTCGCGC CGAGGGGCGG
GCCACATTGA TCGGCAGGTC GTCTTCCACC GCATCCCTCG CGCAACGCCT CTCCTGA
|
|---|
| Protein sequence | MSSATATSPA IAAQAAVAPR AYAVLASSTF AFTICFAVWT MFAILGIPLQ KQLGLSETEF
GLIASMPVLT GSLVRVPLGM WTDRFGGRIV FFLLMLATVA PIWFVADATQ LWQFLALGML
VGLAGGSFSV GTPYVARWFP KKRQGFAMGI FGAGNAGAAL NKFVAPLLVL SAGTWTVVPR
VYAMAMLVTA LLFWFGSATD PSHATGKSVS LRAQLREMRD PRVWRYAQYY SVVFGGYVGL
SLWLTRYYVA EYGFSIKTAA FLAACFSLPG GVLRAVGGWL SDRYGAYRTT WAVMWVCWVA
FFLLSYPQTR FTITGTHGPL DFHIGLSPVA FTSLMGVVGV AMAIGKASVF KFISNDFTDN
IGAVSGAVGL AGGLAGFVLP ILFGVLVDLT GIHSTCFMLL YGAVCVSLVW MHFSFRAEGR
ATLIGRSSST ASLAQRLS
|
|---|
| |