Gene Rpic12D_3588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3588 
Symbol 
ID8021275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp135959 
End bp137242 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content70% 
IMG OID644832379 
Producthypothetical protein 
Protein accessionYP_002983520 
Protein GI241665161 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.453748 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.832185 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGCCA CCGCCCCTAC GCTCTTCTAC GAACGCATGC CGCCGCCCGG CGTGGTGTTC 
GGCTGCCTCT TGCCCGTGCC CTGGGCGGGA GCGGCCGTGG GTTTGCTGCT GGCATTCGGG
CCGACGGGCG GATTGCCTGA TCGGTTTGCG CCGCTTGCAC TTGCGCTCGT GCACGGGTTG
GCGGTGGGGA TGTTGCTGCC CGCCATGCTG GGCGCGCTCT TCCAGCTGTT TCCCGTGGTG
GCGGGCGTGC CTGTGCCGGG TGCCCGCTGG GTATCGCCAT GCGTGGCTGC GACTTGCGTG
GCGACTGCGA TTGCGCTCGC GACCGGATTC CTGGGCGGCG GGCGAACCGC CTTTGCGCTG
GCAGCGTGGT TTGGCGCGCC GCTGCTGGCC ATTCCGGCGG TCCTGCTGAT CCTGGGGGGG
CTGCATGTCG TCAAGGCTGC GGACATGCAC GGCACCGTGC GAACCTTGCG GCGCATTGGC
TGGGCGCTGC TGTTGACGCT GGCCACCGGC GCGACGCTTG GCACGGTGCT GGCCCTGGGG
ATGTTTTCTC CGGCACCTGT CCTGCTGAAC CTGCATGTCG GTTGGGGGCT GGGCGGCTGG
CTGGCCACGC TGCTGGCCGG TGTCGCCTCG ACCGTGCTGC CGATGTTCTG GCAGTCCCCC
CGGTTGCCGG AGCGCTGGCA TCGGTGGATG CCAGGATGGC TGTGGGCGCC CCTGCTGCTG
GGCAGCTTGA TCGGCTGGCG CGGCGGCACG GCGCTCTGGC AGACGTGGGG CTGGCTTGCG
CTGGGCGCGT TGTCCGCGGC CGGGCTGGGC GCGGTCTACC GGGCCCGTCG CAGACACGAC
CCGGGCTGGC CACTGTGGCT GGGCGCGACA GGCGCGTGGT TTGCCGTCGC CGTTCTCGGT
ATCGCTGCGC GTTGGCTGCC GGCCGGTTGG CCGGTTGCCT GGTGGATGGG CGTGCTGGCC
CTCGTGGGCG GTGGTGTGCT GCCCATCAAT GCCATGCTCG GCAAGATCAT CCCGTTCATG
GTGTGGATGC ACTTGCGCAG GCTCGTGCCA CGCCATGTGC GACTGCCCGC CATGCAGACC
CTGATTGGTG AGCGGCAGCA GCACTGGCAT GCCCGGTTGC TGCTCTTGGC GGCGCTTGCA
CTGCTGCTGT TGCCCGTCAG CCCGGGGTGG ATGGCCATGC CGGCCGGCTT GCTGTTTGCC
GTGTCGCAGC TGTGGCTGGG CGCGCAGCTG TGCCGGGCGC TCTGGACGTT TCGCGGCGTG
CGCCGTGCGT TCACGCGCGG TTGA
 
Protein sequence
MSATAPTLFY ERMPPPGVVF GCLLPVPWAG AAVGLLLAFG PTGGLPDRFA PLALALVHGL 
AVGMLLPAML GALFQLFPVV AGVPVPGARW VSPCVAATCV ATAIALATGF LGGGRTAFAL
AAWFGAPLLA IPAVLLILGG LHVVKAADMH GTVRTLRRIG WALLLTLATG ATLGTVLALG
MFSPAPVLLN LHVGWGLGGW LATLLAGVAS TVLPMFWQSP RLPERWHRWM PGWLWAPLLL
GSLIGWRGGT ALWQTWGWLA LGALSAAGLG AVYRARRRHD PGWPLWLGAT GAWFAVAVLG
IAARWLPAGW PVAWWMGVLA LVGGGVLPIN AMLGKIIPFM VWMHLRRLVP RHVRLPAMQT
LIGERQQHWH ARLLLLAALA LLLLPVSPGW MAMPAGLLFA VSQLWLGAQL CRALWTFRGV
RRAFTRG