| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3579 |
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| Symbol | |
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| ID | 8021266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | + |
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| Start bp | 127731 |
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| End bp | 129266 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644832370 |
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| Product | anaerobic nitric oxide reductase transcription regulator |
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| Protein accession | YP_002983511 |
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| Protein GI | 241665152 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.377853 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.799409 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGATC GCCTGCTCTT GACCGACCTG GTTGCCGATC TGCCGCCCGC TGTCCGCATG
CAGCGACTGG TGGGCAGCCT GCGCACGCAC TTTCGCTGCG GGGCCGTAGC GTTGCTGAAA
CTCGAGGAAG ACCACCTGCG GCCGGTGGCC GTGGATGGCC TGGTGCGCGA TGCGCTGGGC
CGGCGCTTCG TGGTCGGACA GCACCCGCGG CTGGCCGCCA TCCTGGCGCG ACATGGCGTG
ACATGCTTCC ACCACGACAG CACCCTGCCC GATCCATACG ACGGGCTCAT TGACGAACAG
GCAGGCGTGC CATTGCCGGT GCACGACTGC ATGGGTCTCG GCTTGCAGGT GGAGGGCCGG
CCCTGGGGCG TGCTGACGCT GGACGCGCTC AAGGTTGGCA CGTTTGACGC GGATGCGCAG
GCCGAACTGG GCCGCCTGGC TGTCGTGGTG GAAGCGGCCG CGCGCACCAC GCGGCTCGAG
GCGGAGATCC GTGCGCTGCG TGCCACGCGC GCTGATTCGC CCGCCGGCGA CGCCACCACC
GACGCAAGCG AAATCGTTGG CCAGAGCCCT GCCATCCACC AGTTGCTGCA CGAGCTGGAA
GTGGTGGCCG ATTCTGAACT GCCGATCCTC GTGCTGGGCG AAACCGGCGT CGGCAAGGAG
CTGTTTGTCC ACCGTCTGCA TCGCCTGTCG CGCCGGCGCG ATCGTCCGCT GGTGCATGTC
AATTGCGCGG CGCTGCCGGA GTCGCTGGCA GAGAGCGAAC TGTTTGGCCA TGTCAAAGGC
GCCTTCTCGG GCGCCACGGG AGAGCGCCCC GGTCGCTTTG AGGCGGCGGA CGGCGGCACC
CTGTTCCTGG ACGAGGTCGG TGAACTGCCG CTCACGGTGC AGGCGAAGCT GCTGCGCGCC
CTGCAGAACG GCGAGATCCA GCGGCTCGGC GCCGACCGCC CCCGCCACGT CGACGTACGG
GTCATTGCAG CGACCAACCG CAACCTGCGC GAGCGCGTGC GCGATGGCGC GTTCCGGGCC
GACCTCTATC ACCGGCTGTC GGTGTATCCG GTGCCGATTC CGCCGCTGCG CGAACGCGGT
AACGACATCC TGCTGCTCGC TGGCCGGTTT CTGGAGCACA ACCGGGCGCG TCTCGGCTTG
CGCAGCCTGA GGCTCAGCCC GGATGCCGAG CGCGCCCTGC GCAGCTATCC ATGGCCCGGA
AACGTGCGCG AGCTGGAACA CGTGATCAGC CGCGCCGCGC TCAAGGTACT GAGCCGGGGC
GCGCGCCGCG ATGACATCGT GACGCTGGGT GCCGAGCTGC TCGACCTCGA CACGGAGGTC
GCCTCACCCG ACACGTCATC GCCCGACGTG CCGCAGGATG TCCGCCCCGG CACGCCCCTG
CGCGACGCCG TTGCCGACTT TCAGCGACGC TGCATCGAAT CGGCATTGGC CACGCACGAT
GACAACTGGG CGCGGGCGGC GCGGGCCCTC GGGCTGGATG CAAGCAACCT GCACAAACTG
GCAAGACGCC TGGGGCTGAA ACCGGCGGAC GGTTGA
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| Protein sequence | MIDRLLLTDL VADLPPAVRM QRLVGSLRTH FRCGAVALLK LEEDHLRPVA VDGLVRDALG
RRFVVGQHPR LAAILARHGV TCFHHDSTLP DPYDGLIDEQ AGVPLPVHDC MGLGLQVEGR
PWGVLTLDAL KVGTFDADAQ AELGRLAVVV EAAARTTRLE AEIRALRATR ADSPAGDATT
DASEIVGQSP AIHQLLHELE VVADSELPIL VLGETGVGKE LFVHRLHRLS RRRDRPLVHV
NCAALPESLA ESELFGHVKG AFSGATGERP GRFEAADGGT LFLDEVGELP LTVQAKLLRA
LQNGEIQRLG ADRPRHVDVR VIAATNRNLR ERVRDGAFRA DLYHRLSVYP VPIPPLRERG
NDILLLAGRF LEHNRARLGL RSLRLSPDAE RALRSYPWPG NVRELEHVIS RAALKVLSRG
ARRDDIVTLG AELLDLDTEV ASPDTSSPDV PQDVRPGTPL RDAVADFQRR CIESALATHD
DNWARAARAL GLDASNLHKL ARRLGLKPAD G
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