Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3565 |
Symbol | |
ID | 8021252 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 110111 |
End bp | 110860 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644832356 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_002983497 |
Protein GI | 241665138 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.181866 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.165295 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGCG CCATACAAGC CGGCGTGTCC GGCACGCACC TCGGCAGCGC GGCCACCGCT GCGCCTGCCG AACCCGAAAT CCCCCGTACC CTGTGCGAGC GCGCTTACCT CGACCTGCGA CAGGACATCG TGCAGGGGCG CCTTGCTCCG GGCGAGCGCC TGCGCGTGGA GCATCTGAAG GATCACTACA GCGTCGGGGC CGGCACGTTG CGTGAAGCGC TGGCGCTGCT CGTCTCGGAT GCGCTCGTCA CGGTGGAGGG GCAGCGGGGG TATCGGGTGA CCGACATTTC GCTGGCGGAC CTGCAGGATC TGACCGACAC GCGAGTGATG CTGGAAACCG AGGCCATCCG TTTGTCCATC CGCCATGGAG ACGCCGAATG GGAGGCCCAT CTGCGCGCCG CCTTCGATGC GCTGAGCGAC GCGGAAGCCC GAGGCCCGTC TGCCAACCCC GAGCATTGGG AACGTGCCAA CCGGCATTTC CACCAGGCAC TCATCGCCGC GCACCGCTCA CCGTGGAGCA AGTACCTGCT GGAACTGCTC TACCGCCACG GCGAGCGTTA TCGGCACGTG GCCATCCGCC TGGGCAGCGC GCAGCCAAGC AGCCGCAACG TGCATGAGGA ACATACGCTG ATCTTCGAGG CCGCCCTGGC CCGGCAGGAA GCGCGTGCCG CATTGGCGCT GGAAGCGCAT ATCCGGCTCA CGCACGAATT GCTCGTCAAG CTGGGGCTCG GCATGACAGC AGAAGCATGA
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Protein sequence | MKRAIQAGVS GTHLGSAATA APAEPEIPRT LCERAYLDLR QDIVQGRLAP GERLRVEHLK DHYSVGAGTL REALALLVSD ALVTVEGQRG YRVTDISLAD LQDLTDTRVM LETEAIRLSI RHGDAEWEAH LRAAFDALSD AEARGPSANP EHWERANRHF HQALIAAHRS PWSKYLLELL YRHGERYRHV AIRLGSAQPS SRNVHEEHTL IFEAALARQE ARAALALEAH IRLTHELLVK LGLGMTAEA
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