| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3561 |
|---|
| Symbol | |
|---|
| ID | 8021248 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012857 |
|---|
| Strand | + |
|---|
| Start bp | 103471 |
|---|
| End bp | 104502 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644832352 |
|---|
| Product | Oxidoreductase FAD-binding domain protein |
|---|
| Protein accession | YP_002983493 |
|---|
| Protein GI | 241665134 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0633] Ferredoxin
[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAACG ACACATTGGA ACCGGCGATG AAACACCAGA TCACCATCGA AGGCGGCTCG
GCATTTTCAG TCGCCGCAGA CGAAGACACC TTGCTGCGAG GTGCGCTGCG CGCCGGCATC
GCCCTGCCCC ATGAATGCAG CGTGGGCGGC TGCGGCGCAT GCCGCTTCGA CCTGCTCTCG
GGGCTCGTGG AATCCATCTG GCCGGAGGCG CCTGGGCTGT CCGAACGCGA CCGCAAGCGC
GGCAAACACC TCGCCTGCCA ATCGCGCCCG CTGGGCGATT GCACGATCCG CGTGCGCTGC
GACGACACTT ACCGCCCGGT GGTGTCGCCC GGCCGCTGGC CCGCCGTGCT GCAGGCCAGG
CGGGAGCTGA CGCCCGACAT GAGCGAATTC ACGTTCGCAG TACACGCGCC CGCTGAGTTT
CGCCCGGGGC AGTACGCGCT GCTGTATCCG CCGCACGCGC CTGGCGCGCG CGCCTATTCC
ATGTCCAACC TGCCCAACGC AGACGGCATC TGGCAGTTTG TGATCCGGCG CGTTCCGGGC
GGGGCCGGCA GCAACGCGCT GTTCGACCAG GTCGAGATCG GGCAGACCGT CACCCTCGAC
GGGCCCTATG GCCATGCCCA CCTGCGCGAC GACAACGCGC GCGACATCGT GTGCATCGCT
GGCGGCTCCG GACTGGCTCC GATGCTGTCC GTCGCCCGCG GAGCGCTCGC GCAGGAGGGC
GCGCAACGCG TGCACTTCTT CTACGGCGGG CGCTCGCAAC CCGACCTCGG CGCCATGGCG
GCCCTGGATG ACCTGGTGGG CGACAACCGC CTCGCGCTCT CGGTCGTGCT GTCCGCGCCC
GGCCCGGAAC TCGGCTGGCA GGGCCCGACC GGCTTCGTGC ATGCCGAGGT CGAACGGGTG
CTGGTGGCGC CGCTGGACCG CTTCGAGTTC TATTTCGCCG GCCCGCCGCC CATGATCGAA
GCCGTGCAGG CATTGCTGAT GCACACGCAT CGGGTGCCGT TTGAACAGAT GCATTTCGAC
CGCTTCGTCT AA
|
|---|
| Protein sequence | MANDTLEPAM KHQITIEGGS AFSVAADEDT LLRGALRAGI ALPHECSVGG CGACRFDLLS
GLVESIWPEA PGLSERDRKR GKHLACQSRP LGDCTIRVRC DDTYRPVVSP GRWPAVLQAR
RELTPDMSEF TFAVHAPAEF RPGQYALLYP PHAPGARAYS MSNLPNADGI WQFVIRRVPG
GAGSNALFDQ VEIGQTVTLD GPYGHAHLRD DNARDIVCIA GGSGLAPMLS VARGALAQEG
AQRVHFFYGG RSQPDLGAMA ALDDLVGDNR LALSVVLSAP GPELGWQGPT GFVHAEVERV
LVAPLDRFEF YFAGPPPMIE AVQALLMHTH RVPFEQMHFD RFV
|
|---|
| |