Gene Rpic12D_3558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3558 
Symbol 
ID8021245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp101762 
End bp102097 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content64% 
IMG OID644832349 
ProductRieske (2Fe-2S) domain protein 
Protein accessionYP_002983490 
Protein GI241665131 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTCC AGAAAGTCTG CTCGCTCGAC GAGCTTTGGG AAGGCGACAT GACCGAGGTC 
GAAGTCGCCG GCCATGTGAT CGTGCTGGTG CGCCCCGAAG GGGGCGAACC GCGTGCGTTC
CAGGGAATCT GCCCGCACCA GGACATCCCG CTGGCCGAGG GCAAGTTCGA CGGTCGGGTG
CTGATGTGCC GCGCACACCA GTGGACCTTC GATGCCAACA CCGGCAAGGG CATCAACCCC
GGCGGCTGCC GGCTTGCCGA GTACGCCTTG AAAGTCGAAG GCGACGACAT CCTCGTCGCA
GTCGAGGGCG TTGAGCCTCT CTTCGCCAAT TGCTGA
 
Protein sequence
MNFQKVCSLD ELWEGDMTEV EVAGHVIVLV RPEGGEPRAF QGICPHQDIP LAEGKFDGRV 
LMCRAHQWTF DANTGKGINP GGCRLAEYAL KVEGDDILVA VEGVEPLFAN C