Gene Rpic12D_3556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3556 
Symbol 
ID8021243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp99964 
End bp101469 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content62% 
IMG OID644832347 
Productmethane/phenol/toluene hydroxylase 
Protein accessionYP_002983488 
Protein GI241665129 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTTAC TGGAACGCGC CGCGTGGTAC GACATCGCAC GCACGACCAA CTGGACCCCG 
AGCTACGTCA CCGAGTCCGA GCTGTTTCCC GACATCATGA CCGGCGCGCA GGGCGTACCG
ATGGAGACCT GGGAAACCTA CGACGAACCC TACAAGACGT CGTATCCCGA ATACGTCAGC
ATTCAACGCG AGAAGGATGC CGGTGCGTAC TCGGTCAAGG CCGCGCTGGA GCGCAGCCGC
ATGTTCGAAG ACGCCGACCC GGGCTGGCTG TCGATCCTGA AGGCGCACTA CGGCGCCATT
GCGCTCGGCG AATACGCAGC GATGAGCGCG GAGGCACGCA TGGCCCGCTT CGGCCGCGCG
CCGGGCATGC GCAACATGGC CACCTTCGGC ATGCTCGATG AGAACCGGCA CGGCCAGCTG
CAGTTGTATT TCCCGCACGA CTATTGCGCC AAGGACCGTC AGTTCGATTG GGCCCATAAG
GCTTATCACA CCAACGAATG GGGCGCGATT GCGGCACGCA GCACCTTCGA CGATCTGTTC
ATGTCGCGCA GCGCGATCGA CATTGCGATC ATGCTCACGT TCGCGTTCGA GACGGGCTTT
ACCAACATGC AGTTCCTCGG TCTCGCGGCC GACGCTGCAG AGGCGGGGGA TTTCACCTTT
GCCAGCCTGA TCTCAAGCAT CCAGACCGAC GAGTCGCGGC ATGCACAGAT CGGTGGTCCG
GCTCTGCAGA TCCTGATCGC AAGCGGCCGC AAGGAACAGG CGCAGAAACT CGTCGACATC
GCCATTGCGC GGGCCTGGCG GCTGTTCTCG CTGCTCACCG GCACCTCGAT GGATTACGCA
ACGCCGCTGC ACCATCGCAA GGAGTCGTTC AAGGAGTTCA TGACGGAGTG GATCGTCGGG
CAGTTTGAAC GCACCTTGAT CGACCTGGGC CTGGACCTGC CCTGGTACTG GGATCAGATG
ATCAACGAGT TCGACTACCA GCATCACGCC TATCAGATGG GCATCTGGTT CTGGCGTCCG
ACGATCTGGT GGAACCCCGC TGCCGGCATC ACGCCCGATT GCCGCGACTG GCTCGAAGAG
AAATACCCCG GCTGGAACGA CACGTTCGGC AAGGCCTGGG ACGTCATCAT CGACAACCTG
CTGGCCGGCA AGCCCGAGCT GACCGTGCCC GAGACACTGC CCATCGTCTG CAACATGAGC
CAGTTGCCGA TCTGCGCGGT TCCGGGTAAT GGCTGGAACG TGAAGGACTA CCCGCTCGAC
TACAAGGGCC GCACGTACCA CTTCAATTCC GAGATCGACC GCTGGGTCTT CCAGCAGGAC
CCGCTGCGCT ATCGCGACCA CCTCACGCTG GTCGACCGAT TCCTCGCCGG CCAGATCCAG
CCGCCCAACC TGATGGGCGC GCTTCAATAC ATGAACCTGG CGCCTGGCGA GTGCGGCGAC
GACGCCCATC ACTACGCGTG GGTCGAGGCG TACCGCAATC AGCGCTACCA GAAGAAAGCC
GCTTGA
 
Protein sequence
MALLERAAWY DIARTTNWTP SYVTESELFP DIMTGAQGVP METWETYDEP YKTSYPEYVS 
IQREKDAGAY SVKAALERSR MFEDADPGWL SILKAHYGAI ALGEYAAMSA EARMARFGRA
PGMRNMATFG MLDENRHGQL QLYFPHDYCA KDRQFDWAHK AYHTNEWGAI AARSTFDDLF
MSRSAIDIAI MLTFAFETGF TNMQFLGLAA DAAEAGDFTF ASLISSIQTD ESRHAQIGGP
ALQILIASGR KEQAQKLVDI AIARAWRLFS LLTGTSMDYA TPLHHRKESF KEFMTEWIVG
QFERTLIDLG LDLPWYWDQM INEFDYQHHA YQMGIWFWRP TIWWNPAAGI TPDCRDWLEE
KYPGWNDTFG KAWDVIIDNL LAGKPELTVP ETLPIVCNMS QLPICAVPGN GWNVKDYPLD
YKGRTYHFNS EIDRWVFQQD PLRYRDHLTL VDRFLAGQIQ PPNLMGALQY MNLAPGECGD
DAHHYAWVEA YRNQRYQKKA A