Gene Rpic12D_3547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3547 
Symbol 
ID8021234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp92792 
End bp93244 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content69% 
IMG OID644832338 
Productprotein of unknown function DUF336 
Protein accessionYP_002983479 
Protein GI241665120 
COG category[R] General function prediction only 
COG ID[COG3193] Uncharacterized protein, possibly involved in utilization of glycolate and propanediol 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.220532 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACAC GTACTGCACA CGACGCCACC TTCCTCAGCG AAGCACGCAG CCAGATCACG 
CTCCCCGCGG CCCAGGCTGC CGTTGCGGCG GCGGTGGAGT CGGCGCAGGC GCAGGGGCTG
CGCATCAACG TGGCCGTGGT CGATGGCGGC GGCGCGCTCG TGGCTTTCGC ACGCATGTCG
GGCGCCTTTC TGCACTCGAT CGACATTGCC ATCGACAAGG CCTACACGGC GGCCAGCTTC
GGTTTTCCCA CCGCGCAGTG GGGTGCCTTG CTGGCCGGCG ACGACATGCT GCGTATTGGG
CTGGCGGAGC GTCCGCGGCT GGTGATGTTT GGCGGTGGCC TGCCGATCAT CGCGGCGGGC
GAGCGCATCG GCGGCATTGG CGTGTCTGGC GGCTCGGCTG AGCAGGACGA AGCGTGCGCC
CGTGCAGGGC TGCACGCGAT CGGCCTGTCG TGA
 
Protein sequence
MSTRTAHDAT FLSEARSQIT LPAAQAAVAA AVESAQAQGL RINVAVVDGG GALVAFARMS 
GAFLHSIDIA IDKAYTAASF GFPTAQWGAL LAGDDMLRIG LAERPRLVMF GGGLPIIAAG
ERIGGIGVSG GSAEQDEACA RAGLHAIGLS