Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3547 |
Symbol | |
ID | 8021234 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | - |
Start bp | 92792 |
End bp | 93244 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644832338 |
Product | protein of unknown function DUF336 |
Protein accession | YP_002983479 |
Protein GI | 241665120 |
COG category | [R] General function prediction only |
COG ID | [COG3193] Uncharacterized protein, possibly involved in utilization of glycolate and propanediol |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.220532 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCACAC GTACTGCACA CGACGCCACC TTCCTCAGCG AAGCACGCAG CCAGATCACG CTCCCCGCGG CCCAGGCTGC CGTTGCGGCG GCGGTGGAGT CGGCGCAGGC GCAGGGGCTG CGCATCAACG TGGCCGTGGT CGATGGCGGC GGCGCGCTCG TGGCTTTCGC ACGCATGTCG GGCGCCTTTC TGCACTCGAT CGACATTGCC ATCGACAAGG CCTACACGGC GGCCAGCTTC GGTTTTCCCA CCGCGCAGTG GGGTGCCTTG CTGGCCGGCG ACGACATGCT GCGTATTGGG CTGGCGGAGC GTCCGCGGCT GGTGATGTTT GGCGGTGGCC TGCCGATCAT CGCGGCGGGC GAGCGCATCG GCGGCATTGG CGTGTCTGGC GGCTCGGCTG AGCAGGACGA AGCGTGCGCC CGTGCAGGGC TGCACGCGAT CGGCCTGTCG TGA
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Protein sequence | MSTRTAHDAT FLSEARSQIT LPAAQAAVAA AVESAQAQGL RINVAVVDGG GALVAFARMS GAFLHSIDIA IDKAYTAASF GFPTAQWGAL LAGDDMLRIG LAERPRLVMF GGGLPIIAAG ERIGGIGVSG GSAEQDEACA RAGLHAIGLS
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