| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3543 |
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| Symbol | |
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| ID | 8021230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | - |
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| Start bp | 88811 |
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| End bp | 89602 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644832334 |
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| Product | 4-oxalocrotonate decarboxylase |
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| Protein accession | YP_002983475 |
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| Protein GI | 241665116 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3971] 2-keto-4-pentenoate hydratase |
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| TIGRFAM ID | [TIGR03218] 4-oxalocrotonate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0271382 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACTGA ATCGCCAAAC CATTGAAGCG CTGGCCGCGC ATGTGGAATC CGCGCAGCTG
GACGTGCGCG ACATCACCAA GATCACCGAC GAATACCCCG ACATGGACTG GGCCGATGCC
TACGACATCC AGGATGAGAT CCGTCGGCGC AAGGAAGCGC GAGGGCTGAA GACCGTCGGC
CTGAAGGCGG GGCTGACCTC CTTCGCGAAG ATGAAGCAGA TGGGCGTTGA AACGCCGGTC
TTCGGCTTCG TGAGCGAGGA CATGGCCCGT GCGGAGGGCA GTGAAATTCG CATGTCGGAG
CTGATCCACC CCAAGGTGGA AGCCGAGATT TGCATCGTCA CCAAGGCGCC GCTGCGTGGT
CCGGGCTGCC ATGTCGGCAA TGTGCTGGCA GCCATCGACT TTGTGATTCC GGCTGTCGAG
ATCATTGACA GCCGTTACCG CGATTTCAAA TTCGACCTCA AGAGCGTGAT TGCCGACAAC
ACGTCGGCCG CGCGCTTCGT GGTGGGTGGC CGTTCCCGCA ATCTGGAGGA ACTGGATCTG
CGTACGTTGG GCGTGGTGCT CGAGAAGAAT GGCCGCGCTG TCGCCATGGC GGCAGGTGCA
GCGGTGCTGG GGCACCCGGC AGCGGCCGTG GCCATGATGG CCAACCATCT GGGCGCGCGC
GGCCAGGAGA TCCCGGCTGG CACCTTCATC ATGACCGGCG GCGTGACCGA AGCCATTGCG
GTGGCCGAGG GCGACAGCGT ATGCGTGCGT TTCCAGGACC TGGGCAACGT GTCGATGCGC
TTCGTGAATT GA
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| Protein sequence | MALNRQTIEA LAAHVESAQL DVRDITKITD EYPDMDWADA YDIQDEIRRR KEARGLKTVG
LKAGLTSFAK MKQMGVETPV FGFVSEDMAR AEGSEIRMSE LIHPKVEAEI CIVTKAPLRG
PGCHVGNVLA AIDFVIPAVE IIDSRYRDFK FDLKSVIADN TSAARFVVGG RSRNLEELDL
RTLGVVLEKN GRAVAMAAGA AVLGHPAAAV AMMANHLGAR GQEIPAGTFI MTGGVTEAIA
VAEGDSVCVR FQDLGNVSMR FVN
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