| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3541 |
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| Symbol | |
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| ID | 8021228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | - |
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| Start bp | 86778 |
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| End bp | 87824 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644832332 |
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| Product | 4-hydroxy-2-ketovalerate aldolase |
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| Protein accession | YP_002983473 |
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| Protein GI | 241665114 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR03217] 4-hydroxy-2-oxovalerate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.236803 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTACGC TGCAAGGCAA GAGCATTACC GTGCATGACA TGACGTTGCG TGACGGCATG
CACCCCAAGC GCCACCTGAT GACGCTCGAC CAGATGCGCA CGATTGCGCA GGGCCTGGAC
GCGGCCGGCG TGCCCCTGAT CGAAGTCACC CACGGCGATG GGCTGGGTGG TTCCTCGCTC
AACTATGGAT TTCCCGCGCA CAGCGACGAG GAATACCTGG GCGCCGTCAT TCCGCTGATG
AAGCAAGCCA AGGTGTCGGC GCTGCTGCTG CCCGGCATCG GTACCGTCGA TCATCTCAAG
ATGGCGCGTG AGCTGGGCGT GCATACGATT CGCGTGGCCA CGCACTGTAC CGAGGCCGAT
GTCTCGGAGC AGCACATCAG CTACGCGCGC AAGCTCGACA TGGACACGGT GGGCTTTCTG
ATGATGGCGC ACATGAACAG CCCTGAGGGG CTCGTCAAGC AAGCCAAGCT GATGGAGAGC
TACGGTGCCA ACTGCATCTA CATCACGGAC TCTGCGGGTT ACATGCTGCC GGACGATGTG
AAGGTGCGTC TGTCTGCCGT GCGTGAAGCG CTAAAGCCTG AGACCGAACT GGGTTTCCAC
GGCCATCACA ACCTGGCCAT GGGGATCGCC AATTCCATTG CGGCCATCGA GTGTGGTGCC
ACGCGCATCG ATGCAGCGGC CGCGGGGCTC GGGGCCGGTG CGGGCAATAC GCCGATGGAG
GTGCTGGTGG CGGTGTGCGA CCGCATGGGC ATCCGTACCG GCGTGGATGT GTGGAAGATC
CAGGATGTGG CGGAGGATTT GGTGGTGCCC ATCATGGACT TCCCCATCCG CATTGACCGG
GACGCACTCA CGCTGGGCTA TGCGGGCGTC TACGGCAGCT TCCTGCTGTT TGCCAAGCGC
GCCGAGAAGA AATACGGTGT GCCCGCGCGT GATCTGCTGG TCGAACTCGG CCGGCGCGGC
ATGGTGGGTG GTCAGGAAGA CATGATCGAG GACACCGCGC TTACCATGGC CCGCCAGCGC
GGCCTGTTGC CTGAACAGGC GGCCTGA
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| Protein sequence | MTTLQGKSIT VHDMTLRDGM HPKRHLMTLD QMRTIAQGLD AAGVPLIEVT HGDGLGGSSL
NYGFPAHSDE EYLGAVIPLM KQAKVSALLL PGIGTVDHLK MARELGVHTI RVATHCTEAD
VSEQHISYAR KLDMDTVGFL MMAHMNSPEG LVKQAKLMES YGANCIYITD SAGYMLPDDV
KVRLSAVREA LKPETELGFH GHHNLAMGIA NSIAAIECGA TRIDAAAAGL GAGAGNTPME
VLVAVCDRMG IRTGVDVWKI QDVAEDLVVP IMDFPIRIDR DALTLGYAGV YGSFLLFAKR
AEKKYGVPAR DLLVELGRRG MVGGQEDMIE DTALTMARQR GLLPEQAA
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