Gene Rpic12D_3539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3539 
Symbol 
ID8021226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp85053 
End bp86279 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content67% 
IMG OID644832330 
Productchromate transporter, chromate ion transporter (CHR) family 
Protein accessionYP_002983471 
Protein GI241665112 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2059] Chromate transport protein ChrA 
TIGRFAM ID[TIGR00937] chromate transporter, chromate ion transporter (CHR) family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAACA GCCTGCATTC GCCTCGCCTC CGGCACGCAA GCAGTCCCCT TGCCGTACTC 
GCCGTCTTCC TGAAGCTCGG CTTGACGTCA TTCGGCGGAC CGGTCGCGCA CATCGGGTAC
TTTCGACGCG AATTCGTCGA GCGCCGGCGC TGGCTCGACG ATGCGGCGTT CACCGATCTG
GTGGGCCTGT GCCAGTTCCT GCCGGGCCCG GCCAGCAGTC AGGTCGGCTT CTCGATTGGC
CTTCTGCGGG CGGGGTGGCT CGGCGGGTTC GCGGCCTGGT GCGGATTCAC GCTGCCGTCC
GTGCTGCTGC TCATCGCCTT TGCCGCGATC TCGCCAGCGC TGGGCGGGCC GCTTGGTGCG
GGACTCGTCC ATGGGTTGAA GCTCGTTGCA GTCGGCATCG TTGCGCAGGC CGTCTGGGAC
ATGGCTCGCA AGCTCTGCCC GGATCTTCGG CGCGCGGGGA TAGCCTTGGC TGTTGTCGTG
CTCTTGGGCT TGCTGAGCTC CGCCTACGCG CAACTGATCG CGATTGCCCT CGGCGCGATT
CTGGGCCTCG TGCTGTGCCG GGGCGTGGTC CTGCCCGGCA CACCGGGTGC CAACGCGCAC
CATGGCCAGT TCCAGGTATC GCGCTACGCT GGCGTCATCG CTCTCGCGCT CTTCTGCGGG
TTGCTGTTCG GGCTTCCCTT CCTGTCGCAT GCCGGTCCGG GTGCGGCGAT TCGTGTGTTC
GATGCGTTCT ATCGCTCCGG TGCCCTGGTG TTTGGTGGCG GGCACGTCGT GCTCCCCCTG
CTGCAGGCGC AAACGGTCGC AACAGGCTGG ATCTCTTCAA ACGACTTTCT CTCCGGATAC
GGGGCCGCGC AGGCGGTGCC CGGCCCGTTG TTCACCTTTG CCGCGTTTCT CGGTTGGCTG
ACACCCGGGA TGCCGAGCCA TTGGGCGGGC GCGGCGCTCG CTACCGTGGG CATCTTTCTG
CCCGGCCTGC TGCTCGTCGT GGCTGCATTG CCTTACTGGC AAGCCTTGCG CACACGTCGA
TCGATGGTGG CGTTGCTCGC GGGCGTCAAT GCGGCCGTCG TCGGCGTGCT GGCCAGCGCC
CTGTATTCAC CGGTCTGGAC GAGCGCAGTC AAGGGGCAGC TTGATTTTGC GATCGCCGCC
GTTGCCTTCT TCCTGCTGGT TCGGTGGAAA CTGCCGCCGA TCGTTGTCGT TGCCCTCTGC
GCGATTGCGG GGGTGGCCTG CGCATAG
 
Protein sequence
MDNSLHSPRL RHASSPLAVL AVFLKLGLTS FGGPVAHIGY FRREFVERRR WLDDAAFTDL 
VGLCQFLPGP ASSQVGFSIG LLRAGWLGGF AAWCGFTLPS VLLLIAFAAI SPALGGPLGA
GLVHGLKLVA VGIVAQAVWD MARKLCPDLR RAGIALAVVV LLGLLSSAYA QLIAIALGAI
LGLVLCRGVV LPGTPGANAH HGQFQVSRYA GVIALALFCG LLFGLPFLSH AGPGAAIRVF
DAFYRSGALV FGGGHVVLPL LQAQTVATGW ISSNDFLSGY GAAQAVPGPL FTFAAFLGWL
TPGMPSHWAG AALATVGIFL PGLLLVVAAL PYWQALRTRR SMVALLAGVN AAVVGVLASA
LYSPVWTSAV KGQLDFAIAA VAFFLLVRWK LPPIVVVALC AIAGVACA