| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3518 |
|---|
| Symbol | |
|---|
| ID | 8021205 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012857 |
|---|
| Strand | - |
|---|
| Start bp | 63989 |
|---|
| End bp | 64747 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644832310 |
|---|
| Product | protein of unknown function DUF347 |
|---|
| Protein accession | YP_002983451 |
|---|
| Protein GI | 241665092 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4705] Uncharacterized membrane-anchored protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.301714 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAT CAACTGAGAA TGCACTGACC AAGGTGCCAG AAGTCACGTT GGGCTTCTGG
CTTATCAAGA TTGCCGCCAC CACGCTCGGG GAAACCGGCG GCGATGCCGT CTCGATGTCA
ATGAATCTTG GATACCTGGT TGGCACTGGC ATCTTTGCCG TGTTTTTTTT GGCAACCGTC
TTCGCCCAAG TCAAAGCAAA GGGGTTCCAC CCCTTGCTTT ACTGGACCAC AATCATCGCC
ACGACCACAG TGGGCACGAC GCTCGCTGAT TTTGCGGATC GCTCACTCGG TATCGGTTAC
GCGGGCGGCT CTTGTTTGCT GCTCGCACTG TTGGTCGGCT CGCTTTTGCT TTGGTATCGC
ACCCTTGGTT CGGTATCGGT GAGCACTGTC AGTTCGCCCA AGGCTGAAGC CTTCTATTGG
TTGACCATCA TGTTCTCGCA GACCTTGGGG ACGGCGTTGG GCGACTGGAC TGCTGACACG
GCGGGCTTGG GCTATACAGG AGCGGCAGTC GTCTTCGTGG CGCTACTTGC CGCCGTTGTG
GCAGCCTATT ACTGGAGCAG CGTGTCGCGC ACGCTGTTGT TCTGGGCCGC CTTTATCCTG
ACGCGTCCGC TTGGTGCCGT GGTTGGAGAT TTTTTGGATA AGCCGCATAA CGCAGGGGGC
TTGGCACTGA GCCGCTACTC AGCATCAGCC GCGCTCCTGG GTTTCATGCT GACTGCAATC
TTGCTGTTCC GGCAAAGGCC GGCTAGCGCT ACACACTGA
|
|---|
| Protein sequence | MKTSTENALT KVPEVTLGFW LIKIAATTLG ETGGDAVSMS MNLGYLVGTG IFAVFFLATV
FAQVKAKGFH PLLYWTTIIA TTTVGTTLAD FADRSLGIGY AGGSCLLLAL LVGSLLLWYR
TLGSVSVSTV SSPKAEAFYW LTIMFSQTLG TALGDWTADT AGLGYTGAAV VFVALLAAVV
AAYYWSSVSR TLLFWAAFIL TRPLGAVVGD FLDKPHNAGG LALSRYSASA ALLGFMLTAI
LLFRQRPASA TH
|
|---|
| |