| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3496 |
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| Symbol | |
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| ID | 8021182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | - |
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| Start bp | 41946 |
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| End bp | 43394 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644832288 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_002983430 |
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| Protein GI | 241665071 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.152282 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.192769 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCACG GCATCGACGA ACGCAGGCGC TGGCTTGCCC TCATCGTGCT CTGTCTGGGC
GTCCTGATGA TCGTGTTGGA TACGACCATC GTGAACGTCG CGCTGCCGTC CATCCGCGCG
GATCTGGGCT TTACCGAAAC GTCGCTGGTG TGGGTGGTCA ACGCCTACAT GCTCACATTC
GGCGGCTTCC TGCTGCTGGG TGGTCGCCTT GGTGACCTGT TCGGGCACCG CAGGCTGTTC
CTGGCGGGCA TCACGTTGTT CACGTTGGCG TCTGCGGCAT GCGGGCTGGC CAATGCGCAG
GGGCTGCTGA TCACGGCGCG TGCCGTGCAG GGTCTGGGTG GTGCGGTGGT ATCGGCGGTG
TCGCTGTCGC TCATCATGAA TCTGTTTACC TCACCGTCAG ATCGCGCCAA GGCGATGGGC
ATCTACGGAT TCGTATGCGC AGGTGGCGGC AGCATCGGCG TGCTGCTGGG TGGGCTGCTG
ACCAGCGCAT TGAGCTGGCA CTGGATCTTC CTGGTCAACC TGCCGATCGG CGTCGCGGTC
TATGCCGCCT GCGTGGCGCT GCTGCCGGCG GGGCAACCGC AGGCCACTCG CGCCAGGCTC
GATGTGGCGG GTGCCATTAC CGTCACAGCC TCGCTGATGC TGGCGGTCTA CGCCATCGTG
CATGGCAACG AAGCGGGCTG GACGTCCACG CCAACCCTTG GCCAACTGGC GATGGCCGTC
GCGCTGATGA TGGCGTTCCT CATCATCGAA TCGCGTGTCC CGCATCCGCT GATGCCGCTG
CGCATGTTCG CGCTGCGCAA TGTGGCGACG GCAAATGTGG TCGGCGTGCT GTGGGCCGCG
GCGATGTTTG CGTGGTTCTT CATCTCGGCC CTCTACATGC AGCGTGTGCT GCACTACAGC
GCCATGCAGG TGGGGCTGGC GTTCCTGCCG GCCAACATCA TCATGGCAGT GTTCTCGCTG
GGGCTGTCGG CCAAGCTTGT GATGCGCTTC GGGATTCGCG CGCCCCTGTC GATCGGGTTG
CTGATGGCGG CGCTCGGGCT CGCGCTGTTC GCGCGTGCGC CCGCCGGCGG CGGCTTCCTG
TTGGACGTGC TGCCGGGCAT GGTGCTGCTG GGCCTGGGCG CGGGCGTAGC GTTCAATCCG
GTGCTGCTGG CTGCCATGAG CGATGTGGCG CCGGATGAGT CGGGCCTCGC TTCAGGCGTG
GTCAACACGT CGTTCATGAT GGGCGGTGCG CTGGGCCTGG CCATTCTGGC GAGCCTGGCT
GCGGCACGCA CCGAAAGTCT GGCGGGCGCA AATGCCGATG CCGTCACGGC GCTCAATGGC
GGTTATCACC TGGCGTTCAT GCTGGGTGCG GGGGCCGCGG TGCTTGCGTC GGTGCTGGCG
GCCGTGTTCG TGCGCACCCG GGCCCACGGA CCGGCACAGG GCGACGCGCC GTCCCCGGCT
TCAATCTGA
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| Protein sequence | MMHGIDERRR WLALIVLCLG VLMIVLDTTI VNVALPSIRA DLGFTETSLV WVVNAYMLTF
GGFLLLGGRL GDLFGHRRLF LAGITLFTLA SAACGLANAQ GLLITARAVQ GLGGAVVSAV
SLSLIMNLFT SPSDRAKAMG IYGFVCAGGG SIGVLLGGLL TSALSWHWIF LVNLPIGVAV
YAACVALLPA GQPQATRARL DVAGAITVTA SLMLAVYAIV HGNEAGWTST PTLGQLAMAV
ALMMAFLIIE SRVPHPLMPL RMFALRNVAT ANVVGVLWAA AMFAWFFISA LYMQRVLHYS
AMQVGLAFLP ANIIMAVFSL GLSAKLVMRF GIRAPLSIGL LMAALGLALF ARAPAGGGFL
LDVLPGMVLL GLGAGVAFNP VLLAAMSDVA PDESGLASGV VNTSFMMGGA LGLAILASLA
AARTESLAGA NADAVTALNG GYHLAFMLGA GAAVLASVLA AVFVRTRAHG PAQGDAPSPA
SI
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