Gene Rpic12D_3487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3487 
Symbol 
ID8021173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp34705 
End bp35892 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content66% 
IMG OID644832280 
Productacyltransferase 3 
Protein accessionYP_002983422 
Protein GI241665063 
COG category[I] Lipid transport and metabolism 
COG ID[COG1835] Predicted acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.547681 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.220575 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCGTT CTTCTGCGTC TCTCCAGAGC ATCCAGGCGC TGCGCGCCTT TGCCGCACTC 
TGTGTCGTCG TGTTCCATTC CGGCCTGGCA CTCAGCCATC CCGGCATCCC CGCGCTGGCG
TGGCTGACCA CGCATGTGAT CAAGCGCGGA TACGTCGGCG TGGACATGTT CTTTGTCATC
AGCGGATTCA TCATCGCCTG GGTTGCGATC CTGGGGCCAA AGGGGCCCGA GCCGCCCGGC
GAATTTCTCA TCAAGCGCGT CTTCCGGATG GGCCCGCCGT ACTGGTTAAT GTCGGTGCTG
CATTCAGCGT GGCTCAATCC GGTATCGACA AGTGCGCTGC TGACCTCGCT GGCCTTCATG
CCGCTGGCCA ATGCCGATGC GCCGTACTTG GGCTACCCCG CGCTCTATGT CGGCTGGTCG
CTCAACTACG AAGCCTTCTT CTATGCGCTG TGCGCGCTGG GTCTGTTGCT GTTCGGCCGG
CGCGCGCTGT GGCTGGTAGC GCTTGCGCTC TTCACCACGA CGATCATCGT GCCGTTCTGG
CACAGCGGGG TCGTGCACCG CGATCCCGCG GCCCTCTACA CGTGGGCAAG CCCCGTACAG
GCCATGGCGG CCAACCCGCT GGTGCTCGAG TTCCTGCTGG GTGCGGGACT GGCCTGGTTG
TATGCAGCGC ATCGGCAACG GCTGACCCCG ACCATCGCGC GCGGGCTGGC GGCAATCGGC
GTGGCGGCAT TCATCATCTC GGTGCTCGCG CCGATACCCA AGTTTGATGC GTTGGGGCGC
GGCCTGCCCG CAGGGGCGTT ACTGGCGGGC CTCGTCGCCA TGGAGCACTG CGGCAAACTG
CGCGTGCCGC GTACGGCCGT CTGGCTGGGC GAGCTGTCGT TCGCACTCTA TCTCGTGCAT
CCGAGCGTCA TCGAAGCCAC GCATCGGCTG GCGGGCGTGC TGCCGCCCGA GTGGATCGGT
GCGCAGTTGA TGCTGTTTGC CGTCAACCTT GCACTCACCC TGGCCATCGC GATGATGCTG
CATCGCTACG TCGAACGGCC CTCCATTGCG CTGGGTCGCC GTCTCGTCGA GTGGACGCGC
ATGCGTCAGC ACGCCTGGCG CGCAAGGCCC GGCTTCCAGA AGCCCCGAAG AGAGACTGCG
CGATCCGGCC CCTTCCCGCG CGACGCCTCA GGCCGTGTCA GGCCGTGA
 
Protein sequence
MNRSSASLQS IQALRAFAAL CVVVFHSGLA LSHPGIPALA WLTTHVIKRG YVGVDMFFVI 
SGFIIAWVAI LGPKGPEPPG EFLIKRVFRM GPPYWLMSVL HSAWLNPVST SALLTSLAFM
PLANADAPYL GYPALYVGWS LNYEAFFYAL CALGLLLFGR RALWLVALAL FTTTIIVPFW
HSGVVHRDPA ALYTWASPVQ AMAANPLVLE FLLGAGLAWL YAAHRQRLTP TIARGLAAIG
VAAFIISVLA PIPKFDALGR GLPAGALLAG LVAMEHCGKL RVPRTAVWLG ELSFALYLVH
PSVIEATHRL AGVLPPEWIG AQLMLFAVNL ALTLAIAMML HRYVERPSIA LGRRLVEWTR
MRQHAWRARP GFQKPRRETA RSGPFPRDAS GRVRP