| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3485 |
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| Symbol | |
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| ID | 8021171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | + |
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| Start bp | 30452 |
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| End bp | 32035 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644832278 |
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| Product | NADH dehydrogenase subunit L |
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| Protein accession | YP_002983420 |
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| Protein GI | 241665061 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.343885 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTGC TTCACTCCGC CCTTGCGATT TGCCTTGTCC TGCCGCCCGG CCTGATGCTC
CTTGCGGCAC TTCTGCCTCA TGTTGCTCGA CTCGGCATGG CGCGCCTCTG GCAGGGCTTC
ATCGGGCTAT CGATCGCTGG GGCCTGCGTG GCGGCGGTCG GCGTGGCGTT GCGAGGCTTG
CCGGACGCTG CCTCGTCTAC GCCATTCTCG CCATGGCTGG GCGCCTCGGT GCTGGGTGGG
CTGCTGGCCA CACTGGTGCA ATTGCTCGGC ACCTGCATCG GTGCGTTTTC CGCCCGGTAT
CTGCAAGGGG AATCGGGCCA AAGGCGCTAC CTCAGCGCGC TTGCCGGGGT GCTGGCCGCG
GTGCACGTGC TCCTGCTGGC GGACCACTGG ACCGTGCTGC TCGCGGCCTG GGCCGCCATC
GGCATCGCCC TGCAACACCT GCTGTGCTTC TACCCCGACC GCCCCTTCGC CTTGCTGGCC
GCGTTCAAGA AGCGCCTCGC AGACCGGCTG GCCGACGCAT TGCTGATTGC CGCGGCCGTA
CTGGCATGGC GCGAGGTCGG CAGCGGCTCG CTCGCGGACT TGTGGGCGCA CGTGGGACAG
GTCGGAGCGT CTCCGGCGCT GCAAGTCAGC GCGGTGTGCG TGGTCCTGGC GGTGGTGCTG
AGAACCGCGC TGCTGCCTGC ACACGGCTGG CTGATCCAGG TCATGGAGGC TCCCACGCCG
GTGTCGGCAA TGCTCCATGC GGGTGTTGTG AACCTGGGCG GCTACGTGCT GATCCGGTTT
GCTCCGCTGC TTGAATCGGC CGCTCCCGCC CGCTGGCTGC TGGTCGCGTT CGGGCTGGCG
ACGGCGGTGG TGGCCGGCCT GGTCATGCTC ACGCGCATCA GCATCAAGGT CCGGCTTGCG
TGGTCGACGG TCGCACAGAT GGGCTTCATG GTGCTCGAGT GCGGGCTCGG CCTGTACTCG
CTCGCCGCGC TGCATCTGGT CGGCCATTCG CTGTACAAGG CGCACGCGTT CCTGTCGGCA
TCGTCGGTGG TGCAGGACAC GCGGCTGCGG GAACTGCAGG GCGAGCAACC ACCTGCGAAA
AGCAGCCTGC TGGCGGCTCC GCTGCTATCC GTGGCAATGG TCCTGCTTGT CCAGGCAGGA
CTCGGCGGCG CGGCTTGGCC GTGGTGGTGG AGCGTCATCC TGGCGCTGGC CTGGGCGCCG
CTGCTTTGGC TTCCCGGGGC AGGCCGCCAT TCAGCGCCGA TGGTGTTCTC ACGCGCGGCG
GTAGGTCTGC TGATGGTTGC CGGACTGACC GCATTGGCCA TGGGCGCTCA CCTCTTGCCC
CTGGGCACGC AGGATCGGCC GGACACGCGC AGCGGCATCG TCGCCTTGCT CGGAATGGCG
TGTCTGCACG GTTTGCTGGT GGCGGTACAG ATGCGCCCGC GGGCGCTCGC CGCCTGGCGG
CGCGCATGCT ACGCGGGTCT GTACATCGAC GAGTTCTATA CACGCCTGGC GTTGCGGCTG
TGGCCGACGC ACTGGACACC CGCCGCACGC AACGGCGCCC ATCGCACCGC CGCACGGACG
GTTGCCATGG ATGCCCAGCC CTGA
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| Protein sequence | MNLLHSALAI CLVLPPGLML LAALLPHVAR LGMARLWQGF IGLSIAGACV AAVGVALRGL
PDAASSTPFS PWLGASVLGG LLATLVQLLG TCIGAFSARY LQGESGQRRY LSALAGVLAA
VHVLLLADHW TVLLAAWAAI GIALQHLLCF YPDRPFALLA AFKKRLADRL ADALLIAAAV
LAWREVGSGS LADLWAHVGQ VGASPALQVS AVCVVLAVVL RTALLPAHGW LIQVMEAPTP
VSAMLHAGVV NLGGYVLIRF APLLESAAPA RWLLVAFGLA TAVVAGLVML TRISIKVRLA
WSTVAQMGFM VLECGLGLYS LAALHLVGHS LYKAHAFLSA SSVVQDTRLR ELQGEQPPAK
SSLLAAPLLS VAMVLLVQAG LGGAAWPWWW SVILALAWAP LLWLPGAGRH SAPMVFSRAA
VGLLMVAGLT ALAMGAHLLP LGTQDRPDTR SGIVALLGMA CLHGLLVAVQ MRPRALAAWR
RACYAGLYID EFYTRLALRL WPTHWTPAAR NGAHRTAART VAMDAQP
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