| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3470 |
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| Symbol | |
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| ID | 8021156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | + |
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| Start bp | 10209 |
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| End bp | 12539 |
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| Gene Length | 2331 bp |
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| Protein Length | 776 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644832263 |
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| Product | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase |
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| Protein accession | YP_002983405 |
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| Protein GI | 241665046 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0620] Methionine synthase II (cobalamin-independent) |
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| TIGRFAM ID | [TIGR01371] 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0697271 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACCA TCCACACCCT CGGCTACCCA CGCATCGGCG CACAGCGCGA ACTGAAATTC
GCCCTCGAAT CGTTCTGGAA GGGCGCCTCG TCCGAAGACG ACCTGCGCGC CACCGGCAGC
GCTTTGCGCG CGCGTCACTG GGCTGCCCAG CGCGATGCTG GCCTCGACTT CGTGACGGTG
GGCGACTTCG CCTGGTACGA CCAGGTGCAG CAGACCGCTG CGCTGCTCGG CGCCGTCCCG
ACGCGCTACG GCTTCGATCC GGCACAGCTC ACGCTGGCGC AGTCTTTCGT GCTCGCGCGC
GGCAACGCCG ACCACGCAGC CATGGAAATG ACCAAGTGGT TCGACACCAA CTACCACTAC
CTCGTGCCGG AACTGACGCC GGACCTGCTC GATCGGCAAT GGGGCCCCGG CACCGAATGG
CTGTTCGACG AGGTGCGTGA AGCGCAGGCG CTCGGCCATC GAGTGAAGGT GGTGCTGCTT
GGGCCGATCA CGTTCCTGCA TCTGGCCAAG GCTCGCCATG GCCTCGCCGA CAAGCTCGCC
CTGCTGCCGC AGGTCCTTCA GGCTTACACG GCCGTGCTAC AGCGCCTGGC CGCGCTGAAG
GTGGAATGGG TACAGATTGA CGAACCCGCG CTGGTGCTCG ATCTGCCGCA AGCCTGGGTC
GATGCATTTG GCCCCGCTCA CCAGGCGCTG GCCGCAGCCA AGGGCCCGAA ACGGCTGCTT
GCGACGTACT TTGAAGCCGC TTCCCACCAC GCTGCGCTGA TCCAGTCCCT GCCGGTCGAT
GGCGTACACC TGGATCTCGT TCGCGCGCCG GATCAGGTCG CCGCCTTCGC GCCATGGTCT
GCCGACAAGG TCCTCTCCGT TGGCGTAGTG GACGGCCGCA ACATCTGGCG TACGGATCTG
ACCCGCGTGC TGGCGCACCT CACCCCGCTG GCACAAGCCC TGGGCGACCG CCTGTGGATC
GCGCCGAGCT GCTCGCTGCT GCACGTGCCG GTAGACCTGT CGGCTGAAAC GAAACTCGAC
GATGAACTCA AGGGCTGGCT GGCCTTTGCG CGCCAGAAGC TGGACGAACT CGCCGTGATC
AAGCGCGCGC TTGTGGAAGG GCCGGCCGCC GTGCAGGGCG AGCTCGATGA CAACCGCATC
GCGATCGCCT CGCGCACCCA ATCACGCCGG GTACACAACG CGGGCGTCAA GAAACGCGTT
GCCGCCATCC GCGCAGCAGA CGCCGTGCGC GCCGCACCGT ATCCCGCCCG TGCCGACGCG
CAGCAGGCGC GGCTGAACCT GCCGCTGCTG CCGACCACCA CCATCGGCTC GTTCCCGCAA
ACACCCGAGA TCCGCCGGGC GCGCGCACAG CACAAGCGCG GCGACCTGCC GGCGCTGGAC
TACCTGCAGC GCATGCGCAC CGAGATTGCC GACGTCGTAC GCCGCCAGGA AGCGCTCGGC
CTGGACATGC TCGTGCACGG CGAAGCCGAG CGCAACGACA TGGTCGAATA CTTCGGCGAG
CTGCTGTGGG GTTACGCCTT CACGGCCAAC GGCTGGGTGC AGAGCTATGG CTCGCGCTGC
GTCAAGCCCC CGGTCATCTA CGGCGATGTG TACCGCCCCG AAGCCATGAC CGTCGAGTGG
TCCAAGTATG CGCAAAGCCT GACCTCGAAG CCGATGAAGG GCATGCTGAC TGGTCCGGTC
ACGATGCTGC AGTGGTCGTT CGTGCGCGAC GATCAGCCGC GCGAGCAGAC CGCACTGCAG
ATTGCGCTGG CCCTGCGCGA CGAGGTATGC GACCTGGAGG CCGCGGGCAT CGCCGCCATC
CAGATCGATG AGCCGGCGTT CCGCGAGGGT CTGCCGCTGC GCGCATCCGA TGTGCCGACT
TACCTGGAAT GGGCGGCACG TGCGTTCCGC GTGTCGGCGT CGGGCGTACG CAACGATACG
CAGATCCACA CGCACATGTG CTATTCGGAG TTCAACGACA TCCTGCCGGC CATCGCGTCG
ATGGATGCCG ACGTGATCAC CATCGAGACC TCGCGCTCGA ACATGGAACT GCTCGATGCG
TTTGCCGAGT TTGCGTATCC GAACGAGATC GGTCCGGGCG TATATGACAT TCACTCGCCG
CGCGTGCCGC GCGTGGATGA AATGGAATCC CTGCTCGACA AGGCGGCACA GGTCGTGCCG
GTGCAGCGCC TGTGGGTGAA TCCGGATTGC GGCCTGAAGA CGCGTGGCTG GCCGGAGGTG
GAGGCTGCGC TGCAAGGCAT AGTGGAAGCC ACGCACCGTC TTCGCGCGAA GCATGCCAAC
GCAAAGCGTG CAGGCAGCAA GGCGGCGCAC GTCGAGGGCG AGATGGCCTG A
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| Protein sequence | MTTIHTLGYP RIGAQRELKF ALESFWKGAS SEDDLRATGS ALRARHWAAQ RDAGLDFVTV
GDFAWYDQVQ QTAALLGAVP TRYGFDPAQL TLAQSFVLAR GNADHAAMEM TKWFDTNYHY
LVPELTPDLL DRQWGPGTEW LFDEVREAQA LGHRVKVVLL GPITFLHLAK ARHGLADKLA
LLPQVLQAYT AVLQRLAALK VEWVQIDEPA LVLDLPQAWV DAFGPAHQAL AAAKGPKRLL
ATYFEAASHH AALIQSLPVD GVHLDLVRAP DQVAAFAPWS ADKVLSVGVV DGRNIWRTDL
TRVLAHLTPL AQALGDRLWI APSCSLLHVP VDLSAETKLD DELKGWLAFA RQKLDELAVI
KRALVEGPAA VQGELDDNRI AIASRTQSRR VHNAGVKKRV AAIRAADAVR AAPYPARADA
QQARLNLPLL PTTTIGSFPQ TPEIRRARAQ HKRGDLPALD YLQRMRTEIA DVVRRQEALG
LDMLVHGEAE RNDMVEYFGE LLWGYAFTAN GWVQSYGSRC VKPPVIYGDV YRPEAMTVEW
SKYAQSLTSK PMKGMLTGPV TMLQWSFVRD DQPREQTALQ IALALRDEVC DLEAAGIAAI
QIDEPAFREG LPLRASDVPT YLEWAARAFR VSASGVRNDT QIHTHMCYSE FNDILPAIAS
MDADVITIET SRSNMELLDA FAEFAYPNEI GPGVYDIHSP RVPRVDEMES LLDKAAQVVP
VQRLWVNPDC GLKTRGWPEV EAALQGIVEA THRLRAKHAN AKRAGSKAAH VEGEMA
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