Gene Rpic12D_3465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3465 
Symbol 
ID8021151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp3793 
End bp5103 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content66% 
IMG OID644832258 
ProductABC transporter related 
Protein accessionYP_002983400 
Protein GI241665041 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.320704 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAAGC CTCAATCTTC CGCCCCGGTG ATCGAGCTGT GCGAGGTCTG CAAGTCGTTC 
GCCAAGCCTT CCGGCGAGCC GCTGACGGTG CTCGGCAAGA TCGATCTTGC CGTGCACGAC
GGCGAGATCC TCGGGCTGCT GGGCCGTTCC GGCTCGGGAA AATCGACGCT GCTGCGCATT
GCTGCGGGCC TCGTCAAGCC GACTTCGGGG TGCGTGCGCT ATCGCGGCCA GCCGCTTGAC
GGGCCCGCGG AGGGCATTGC CGTCGTCTTC CAGACGTTCG CGCTTTACCC GTGGCTGACG
GTGCTCGACA ACGTCGAGCT CGGGCTGGAC GCGCTGAGTC TGCCGCTCGA CGAGGCGCGC
CGGCGCGCGA TGGCCGCCAT CGAGCTGACC GGCCTCGACG GCTTCGAATC GGCGTTTCCG
CGCGAGCTCT CGGGGGGGAT GCGCCAACGG GTCGGCTTCG CGCGCGCGCT CGTCAGCGAG
CCGACCCTGC TGCTGATGGA CGAACCGTTC TCTGCGCTGG ATGTGCTCAC CGCCGAAACG
TTGCGCACCG ATTTCCTCGA CCTGTGGGCG CAGCGGCAGT TGTCGACGCG GGCGGTGCTG
ATGGTCACCC ACAACATCGA GGAGGCCGTG CTGATGTGCG ACCGCATCCT CGTTCTGGGC
GCCAATCCAG GGCACATCGT GGCCGAGATC TGCGTGCCTC TGCCGCAGCC GCGCAACCGG
TTGGATGCTG CATTCCAGTC GATCGTCAAT GACATCTACT CGATCCTGAC GGCGCGCCTG
ACCGAAGTGC CCGATACCCG CGCGCATAGC GGCCTGGCCA TGCGTTTGCC GGGGGTATCG
GGCCACCAGA TCGATGAGCT GATCGAGGCC CTGGCCGCGC CGTCCAACGC GGGTCACGTA
ACGCTTCCGA AGATTGCCGG AGCCCTCACG CTGCGGCTTC ACGACCTGTT CCCGATCGCC
ACCGCGCTTC ACATTCTCGA ATTTGCCGAG TTGCATGGCG GCACCCTCAA GCTCACCACT
GCCGGCCGTG TCTTCGCGCA AAGTGGGGAT GACGAGCGCA AGCGCCTGTT CCGGGAACAT
TTGCAGCGGT TCGTTCCACT GGCCATGCGC ATCCGCGAAG TCCTCGACGA GCGCGAAGGG
CACCGTGCGC CACGAGCGCG CTTTGCGCTG GAGTTGCAGG ACCACCTGAA CCAGGCCGAT
GCAGAGGTCA CCCTGCGTAC CGCGATCGAC TGGGGACGTT ACACCGGGCT CTTCAATTAC
GACGACCGCA CGCGCATGTT CAGCGGTCCG GCCGAGCCCG CGCCGCAGTA G
 
Protein sequence
MSKPQSSAPV IELCEVCKSF AKPSGEPLTV LGKIDLAVHD GEILGLLGRS GSGKSTLLRI 
AAGLVKPTSG CVRYRGQPLD GPAEGIAVVF QTFALYPWLT VLDNVELGLD ALSLPLDEAR
RRAMAAIELT GLDGFESAFP RELSGGMRQR VGFARALVSE PTLLLMDEPF SALDVLTAET
LRTDFLDLWA QRQLSTRAVL MVTHNIEEAV LMCDRILVLG ANPGHIVAEI CVPLPQPRNR
LDAAFQSIVN DIYSILTARL TEVPDTRAHS GLAMRLPGVS GHQIDELIEA LAAPSNAGHV
TLPKIAGALT LRLHDLFPIA TALHILEFAE LHGGTLKLTT AGRVFAQSGD DERKRLFREH
LQRFVPLAMR IREVLDEREG HRAPRARFAL ELQDHLNQAD AEVTLRTAID WGRYTGLFNY
DDRTRMFSGP AEPAPQ