| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3458 |
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| Symbol | |
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| ID | 8021143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 3644984 |
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| End bp | 3646648 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644832251 |
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| Product | putative inner membrane protein translocase component YidC |
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| Protein accession | YP_002983393 |
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| Protein GI | 241665033 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATCA AACGCACCAT TCTCTGGGTG ATCTTCTCGC TGGCGGTTGT CCTGCTGTTC
GACAACTGGC AACGCGCGAA TGGCCACCAG TCGATGTTCT TCCCGACACC GCAAACGGCC
ACCACGACGG CCGCTGCGCC GGGCAGCACG CCCGCAGGCG ACGTGCCGAA GAGCGCCTCG
GCGACAGCAG CCGCCGGGTC GCAAGCCGCC CCGGCCACGG GCGCCGCTTC GCAGGCACCG
GCTTCGGAAA AGATCGTCAT CTCGACCGAC CTGCTGCGCG CCACCATCGA TACCGACGGC
GCCATCGTCA CCAAGCTCGA ACTGCTTGAC CAGAAGGACC ACGACGGCAA CCCGATGGTG
CTGTTCGACC GCAGCGTCGA GCGTACCTAT CTGGCGCGCT CGGGCCTCAT CGGCGGCGAT
TTCCCGAACC ACACGACGGT GTTCACGGCA TCTGCCGGCC CGCGTGACCT GGGCACGGGC
AACGATGTCT CGATCACGCT GACGGCCGAC AAGGGCGGCG CCAAGCTGGC CAAGACGTAC
GTCTTCAAGC GCGGCAGCTA CGTGATCGAC ACGCGCTTCG ACGTGACCAA CGACGGCACT
GCGCCGATCA ACCCGACGCT ATATATGGAA CTGGCCCGCG ATGGCGGCGC TGTGGAGCAA
TCGCGCTTCT ACAGCACGTT CACCGGCCCG GCCGTATACA CCGACGGCGA CAAGTTCCAC
AAGATCACCT TTGCCGACAT CGACAAGGGC AAGGCACAGG TGCCAGCCCC GACCGACAGC
GGCTGGGTGG CGATGGTGCA GCACTACTTT GCATCGGCTT GGATTCCGGC AGACAACGTC
AAGCGCGAGT ACTACGTCAA CCGCGTCGAT ACCAACTTCT ACCGCATCGG CATCCAGGAG
CCGCTGGGCA CCGTGGCGCC GGGCGCCAGT GTGTCGGCCA CGGCACGTCT GTTCGCCGGC
CCGCAGCAAG CGCGCATGCT TGAGTCCATC ACGCCGGGCC TGGACCTGGT GAAGGACTAT
GGCTGGCTGA CCATCGTCGC CAAGCCGCTG TTCTGGCTGC TGGAAAAGAT TCACGCACTG
CTGGGCAACT GGGGCTGGTC GATCGTTGCA CTCACCGTGC TGATCAAGCT GGTGTTCTTC
CCGCTGTCGG CCACGAGCTA CCGCTCGATG GCCAAGATGA AGGACCTGCA GCCGCGCATG
ACGGCCATCC GCGAGCGCCA CAAGGGCGAT CCGCAGAAGA TGAACCAGGA AATGATGACG
CTGTACCGCA CCGAGAAGGT CAATCCGCTC GGCGGCTGCC TGCCGATCGT GATCCAGATT
CCGGTGTTCA TGGCGTTGTA CTGGGCGCTG CTGTCGTCGG TCGAAATGCG CGGTGCGCCC
TGGATCGGCT GGGTGCACGA CCTGTCCACG CCCGACCCGT TCTACATCCT GCCGGTGCTG
ATGGCCGTGT CGATGTTCGT GCAGACCAAG CTGAACCCGA CCCCGCCGGA CCCGGTGCAG
GCCAAGGTGA TGATGTTCAT GCCGATCGCG TTCTCGGTGA TGTTCTTCTT CTTCCCGGCC
GGCCTGGTGC TGTACTGGGT GGTGAACAAC TGCCTGTCGA TCGCGCAGCA ATGGTCGATC
AACCGCATGC TGGGCACCAA CAACAAGGCG GCACCCGCCA AGTAA
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| Protein sequence | MDIKRTILWV IFSLAVVLLF DNWQRANGHQ SMFFPTPQTA TTTAAAPGST PAGDVPKSAS
ATAAAGSQAA PATGAASQAP ASEKIVISTD LLRATIDTDG AIVTKLELLD QKDHDGNPMV
LFDRSVERTY LARSGLIGGD FPNHTTVFTA SAGPRDLGTG NDVSITLTAD KGGAKLAKTY
VFKRGSYVID TRFDVTNDGT APINPTLYME LARDGGAVEQ SRFYSTFTGP AVYTDGDKFH
KITFADIDKG KAQVPAPTDS GWVAMVQHYF ASAWIPADNV KREYYVNRVD TNFYRIGIQE
PLGTVAPGAS VSATARLFAG PQQARMLESI TPGLDLVKDY GWLTIVAKPL FWLLEKIHAL
LGNWGWSIVA LTVLIKLVFF PLSATSYRSM AKMKDLQPRM TAIRERHKGD PQKMNQEMMT
LYRTEKVNPL GGCLPIVIQI PVFMALYWAL LSSVEMRGAP WIGWVHDLST PDPFYILPVL
MAVSMFVQTK LNPTPPDPVQ AKVMMFMPIA FSVMFFFFPA GLVLYWVVNN CLSIAQQWSI
NRMLGTNNKA APAK
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