| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3455 |
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| Symbol | |
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| ID | 8021140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 3641609 |
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| End bp | 3642841 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644832249 |
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| Product | integrase family protein |
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| Protein accession | YP_002983391 |
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| Protein GI | 241665031 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCGGA CAGTCCCTCC CCTCACCGAC ACACGCATCA AGGCCCTCAA GCCGAAGACC
GCCCGTTACC AGGTCGCGGA TGGCGGCGGC TTGGTGCTGG AGATCATGGT GTCGGGGTCG
AAGGTCTGGC GGTACCGCTA CTCGCTGCAC GGCAAGCAGC AGCCCCTTGT GACGATCGGC
GACTATCCGG CCGTCAGCCT GACCGCAGCG CGTGAGCGAG CCCGCAAGTA TTCCGAGATC
GTTGCGGCTG GCTCGTCGCC CATTGCTCAA TCCAAGAAGG ATCGCGGCGC CGATACCGCT
CCGACCACCG TTCGCGAGTT CTCGGCACAG TGGTTCGAGG GGACGATTGC AGACAAATCC
GATGACTATC AACGAGGTGT GCGGCGCGCC CTCGACAAGG ACATCCTCCC CGCCATCGGT
TCAAAGCCGC TCACAGAAGT CACGCCTGGG GACGTACTGG AGCTTTGCGA CAAGATCAAG
GCTCGCGGCG CACCCAAGAT GGCGCTCTTC ACACGCAATG TGCTCAAGCG CATGTATGAG
TACGCTGTCG CCCGCCACGT CGCCACGACA AACCCCGCCC AAGCACTGGT TGCCCGCTTC
ATCGCGACGC AAGAGAGTCG AACCCGCGTT CTGACGCCGG ATGAGATCGG CAACGTTCTA
CGCACCATCT ACGCCTCCGA CATTCGGCGC CTGCACAAGC TGGCCTTGCA CCTGCTCATC
CTGACGATGG TGCGCAAGTC TGAGCTGATC GAGGCCCGCA AATCGGAATT CGATCTGGAT
GCTGCGATCT GGCGCATTCC AGCCGAGCGC ATGAAGAAGG ACAAAGAGCA CTGGGTCTAC
CTGTCAGCTC AGGCCGTCTC CATGCTGCGC GAGATCTTCG CGCTCACAGA GGGCAGCGCA
TTCCTGTTCC CGACGAGTCG CGGCGGCAAG GACGTTCCGA TTGCCAAGAG CACGCTCAAC
ACTGCTGTGC GGGCGCTCGA CATGGAGGTA CAGCACTTCG TGCTGCATGA CTTCCGCCGC
ACAGCGTCAA CGCACCTGCA CGAGATGGGC CAGTCGTCAG ACGCCATCGA GAAGGCGCTT
GCTCACAGCA TCAAGGGGAT CAAAGGCGTC TACAACCGCG CAGAGTACGC AGAGGAACGA
CGTCGCATCC TGCAGCTTTG GGCTGACTTC GTGGACGCGC AGATCTCGGA AGAAAAAAAG
GTGGTGATTG GCCGCTTCGG CAACGCTGCC TAG
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| Protein sequence | MPRTVPPLTD TRIKALKPKT ARYQVADGGG LVLEIMVSGS KVWRYRYSLH GKQQPLVTIG
DYPAVSLTAA RERARKYSEI VAAGSSPIAQ SKKDRGADTA PTTVREFSAQ WFEGTIADKS
DDYQRGVRRA LDKDILPAIG SKPLTEVTPG DVLELCDKIK ARGAPKMALF TRNVLKRMYE
YAVARHVATT NPAQALVARF IATQESRTRV LTPDEIGNVL RTIYASDIRR LHKLALHLLI
LTMVRKSELI EARKSEFDLD AAIWRIPAER MKKDKEHWVY LSAQAVSMLR EIFALTEGSA
FLFPTSRGGK DVPIAKSTLN TAVRALDMEV QHFVLHDFRR TASTHLHEMG QSSDAIEKAL
AHSIKGIKGV YNRAEYAEER RRILQLWADF VDAQISEEKK VVIGRFGNAA
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