| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3422 |
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| Symbol | |
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| ID | 8021107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 3614125 |
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| End bp | 3615534 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644832216 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002983358 |
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| Protein GI | 241664998 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCCGG ATGCAGCTAG CATCGGACGT TTTCGTTTTT TGTGTTTTTT TGGTTTCGCT
GACGGTTTGC TGGCGTCGCA CTCGTTTGCG CGGCGACGCG GCACCCGGCA TTCCGCTTAT
CGCCACATGG GGTCATCTAT GACGAACACC CGCCGTTATC ACCAACTCGC TGCCGCCGCA
TTCATGGTGG TGGCACTTGC AGCCTGCGGT AACAAGCAGG CACAAGGGCC GGGCGGCGCC
GGCATGCCTC CGACCGAAGT CGGCGTTGTG ACCGTGCAGC CGCATTCCGT TGGCCTGACC
AGCGAGTTGC CGGGGCGCCT GGAGGCTACG CGTGTGGCAC AGGTGCGGGC TCGGGTCGCG
GGCATTGTGC TCAAGCGCAC CTACGCGGAA GGCAGTGACG TAAAGGCCGG CCAGCAGTTG
TTCCAGATCG ATCCGGCGCA GTACCGGGCA TCGCTGGATA GCGCCAAGGC ACAGCTGGCG
CGATCGGAAG CCACACAAAC GCAGGCGCAA CTGAAGGCCG AGCGCTACAA GCCGCTGGTT
GCCACCAACG CCATCAGCAA GCAGGACTAC GACGACGCCA CCGCCGCCGC CAAGCAAGCC
ACCGCTGACG TGGCCGCCGC CCGCGCTGCC GTGGAGACCG CCAAGTTGAA CGTCGGCTAT
GCCAGTGTGA CTTCGCCCAT CTCCGGTCGT GCCGGTCTGG CGCAGGTCAC CGAAGGCGCG
CTGGTGGGCC AGGGCGAGGC GACGCTGCTG ACCACCGTTC AGCAGATCGA TCCGATCTAC
CTGACGTTCA CGCAGTCGAG CACCGAAGTG ATGCGTCTGC AGCAGGCGCT CAAGGACGGC
AAGCTGGCCA AGGCCGGTGG TGACGCGGCC AAGGTCACGC TCGTGACAGA AGACGGCCGC
GCCTACGCGC AAACGGGCAA GCTCTATTTC TCGGACCTGA CGGTGGACCC TGCTACGGGC
ACGATCACGC TGCGCGCGAT TGTTCCGAAC GCCGACCGCA CGCTGCTGCC GGGCATGTAC
GTGCGTGCCC GCCTGGAGCA GGCCGTGGAC GAACAGGCCA TCACGGTGCC GCAACAAGCG
GTGACGCGCA GCCCGGACGG CGCATCGGTC ATGGTCGTCG ACGAGAAGGG CATGGCAGCG
GTGCGCCAGG TCCAGGCCGA CCGCTCGACC GGTACGGAAT GGATCGTCTC CAGCGGCCTG
AAGGCGGGCG ACAAGGTGAT CGTCGACGGC CTGCAGAAGG TCCGTCCGGG CGCGCCGGTC
AAGGCCGTGC CGTGGCAACC GATGTCGGCA GGCCAGGGCA AGGGCTCGCA AGGTCAGGGC
GGCCAGGGTA GCGGCGCAGC ACCCGTACCG GCAGCCAGCG CGCCTGCTGC AAGCACTCCC
GCTGCCAGCG CACCGGCAGC CAAGCAGTAA
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| Protein sequence | MPPDAASIGR FRFLCFFGFA DGLLASHSFA RRRGTRHSAY RHMGSSMTNT RRYHQLAAAA
FMVVALAACG NKQAQGPGGA GMPPTEVGVV TVQPHSVGLT SELPGRLEAT RVAQVRARVA
GIVLKRTYAE GSDVKAGQQL FQIDPAQYRA SLDSAKAQLA RSEATQTQAQ LKAERYKPLV
ATNAISKQDY DDATAAAKQA TADVAAARAA VETAKLNVGY ASVTSPISGR AGLAQVTEGA
LVGQGEATLL TTVQQIDPIY LTFTQSSTEV MRLQQALKDG KLAKAGGDAA KVTLVTEDGR
AYAQTGKLYF SDLTVDPATG TITLRAIVPN ADRTLLPGMY VRARLEQAVD EQAITVPQQA
VTRSPDGASV MVVDEKGMAA VRQVQADRST GTEWIVSSGL KAGDKVIVDG LQKVRPGAPV
KAVPWQPMSA GQGKGSQGQG GQGSGAAPVP AASAPAASTP AASAPAAKQ
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