| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3417 |
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| Symbol | |
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| ID | 8021102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 3608539 |
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| End bp | 3609567 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644832211 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_002983353 |
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| Protein GI | 241664993 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.565807 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATTG CCGTACTGGA CGACTACCAA GACGCTGTTC GCAAGCTGGA TTGCTTTAGC
TTGCTGCAAG ACCACGAAGT CAAAGTGTTC AACAACACCG TCAAAGGTGT GGGGCAATTG
GCCGCACGCG TGGCGGACGT TGAAGCCATT GTGCTGATCC GGGAGCGCAC GCGCGTGACG
CGTCAGTTGC TCGATCGCCT GCCCAAACTC AAGATCATCA GCCAGACGGG CCGCGTATCG
CGCGACTCGG GCGGCCATAT CGATCTGGAT GCCTGCACCG AAAAGGGTGT GGTGGTGCTG
GAGGGGAAAG GCTCGCCGGT GGCGCCGGCC GAGCTGACCT GGGCGCTGGT CATGGCCGCG
CAGCGCCGCA TTCCCCAATA CGTGGCGAGC CTCAAGCACG GCGCGTGGCA GCAGTCGGGG
CTGAAATCCA CCACGATGCC GCCCAACTTT GGCATCGGCC GGGTCCTGAA GGGCCAGACG
CTGGGCATCT TCGGCTACGG CAAGATCGGC CAGCTCGTGG CCGGTTACGG CCGTGCTTTC
GGCATGAATG TACTGGTGTG GGGTCGCGAG GGCTCGCAGG AACGGGCGCG CGCCGATGGC
TTTGCTGTGG CGGAATCGAA AGACGCCCTG TTCGAGCAGT CCGATGTGCT GTCGGTCCAC
CTGCGCCTGA ACGACGAAAC GCGCGGCATC GTCACCGTGG CTGACCTCAC CCGCATGAAG
CCGACCGCCC TCTTCGTCAA CACTAGCCGC GCCGAGCTGG TCGAAGAAAA CGGCCTGGTG
ACGTCGCTCA ACCGCGGGCG ACCGGGCATG GCCGCCATCG ACGTGTTCGA AACGGAGCCC
ATCCTGCAGG GCCACACCCT GCTGCGCATG GAGAACTGCA TCTGCACGCC GCACATCGGG
TACGTCGAAC GCGAAGGTTA CGAGCTGTAC TTCAGCGTTG CGTTCCAGAA CATCCTCGAT
GTCCTGCAGG GCAACGTCGA CAGCGTGGTC AACCCGACGG CGCTGGCGCC TGCCCTGATC
CGCGCATAA
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| Protein sequence | MKIAVLDDYQ DAVRKLDCFS LLQDHEVKVF NNTVKGVGQL AARVADVEAI VLIRERTRVT
RQLLDRLPKL KIISQTGRVS RDSGGHIDLD ACTEKGVVVL EGKGSPVAPA ELTWALVMAA
QRRIPQYVAS LKHGAWQQSG LKSTTMPPNF GIGRVLKGQT LGIFGYGKIG QLVAGYGRAF
GMNVLVWGRE GSQERARADG FAVAESKDAL FEQSDVLSVH LRLNDETRGI VTVADLTRMK
PTALFVNTSR AELVEENGLV TSLNRGRPGM AAIDVFETEP ILQGHTLLRM ENCICTPHIG
YVEREGYELY FSVAFQNILD VLQGNVDSVV NPTALAPALI RA
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